| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3324 |
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| Symbol | trmE |
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| ID | 4955719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3604531 |
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| End bp | 3605916 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640182515 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001114649 |
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| Protein GI | 134301153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTAGATG ATACCATTGT AGCTATAGCC ACAGCACTAG GAGAAGGAAG TATCGGTGTT
ATCCGTATGA GTGGCCCAGA TGCCATAACC ATTGGCAAAA AGGTATTTAG GCCAAAGTAT
AATAAAGAAT GGTACCAAAA GGATAATTAT AAGATTATCT ATGGTCATGT AATTAACCCG
GAAACAGGGG AAATTATTGA TGAAGTACTT CTTTCTATTA TGAGAGGACC GAAAAGTTTT
ACTGCGGAAG ATGTTATTGA AATAAGTTGT CATGGTGGGA TAATACCTTT ACGAAAGGTA
TTAGAAGTGA TTCTTAGAAA CGGTGCACGT CATGCTGAAC CTGGAGAATT TAGTAAAAGA
TCCTTCTTAA ATGGTCGCTT GGATTTAGCC CAGGCGGAAT CCATTATTGA TATTATTAGG
GCTAAAACCG ATGCCGGGGC AAAAATAGCT GTGAATCAGC TGGGTGGTAA ACTATCGGAA
AAAGTGAATG GTCTACAGCA TAAAGTTTTA GGACTACTGG CTAAAATTGA GGCGATTATT
GATTTTCCTG AGGATGATAT TCCAGAAGAA AATCTGTTAG GAATAAGTAA GGAGTGCAAT
AGTTTAATAA AAGAAATAGA ACATTTATTG GCGTATGCAG ATACTGGTAA AATATATCGC
GAGGGACTTA AGACTGTTAT AGTAGGAAAA CCAAATGTGG GAAAATCATC CCTTCTGAAC
GCCCTTCTTC ATGAACAGCG AGCCATTGTG ACCGATATAC CGGGAACAAC TAGGGATGTT
ATAGAAGAAA TACTTAGTAT AAAAGGTGTA CCCCTAAAAA TAATAGACAC TGCCGGGTTA
CGAGAGACCC AGGATCTAGT GGAGAAAATT GGAGTAGAAA AATCAAGGGA ACTTTTAAAT
CAGGCAGATA TAGTTTTATT TGTTTTAGAT GCCACTACTG GTATATCAGA TGAAGATCGA
AAAGTAATTG ATTTAATCAA AGATAAAAAA GTTCTTATTC TAATAAATAA AATTGATATT
ACAAAAAACA AAATAGATTC CCATGAGATT AGACAGCTAA TAAATTTCAG TGAGATTATA
GAAATTTCCG CTCAAAAAGA AATCGGGTTG GACAAACTTG AGGAAACTAT TTTTAATATG
GTGGTTGAGG GAAAAATTAC CACAACAGAT AGTATTTTTG TATCCAACTC CAGACATAAG
CATGCCTTGG AAAGGGCAAT GCAACATCTC CTTGAGGCTA GCAAAGGTTT GCAAGAATAC
GTTCCTGCAG ATCTAGTTTC CATTGATTTA AAATCCTCCT GGGAAATTCT CGGTGAAATA
ACAGGGAACA GTGTAACTGA AGACTTGATT GATAGAATTT TTTCGGATTT TTGTATTGGT
AAATGA
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| Protein sequence | MLDDTIVAIA TALGEGSIGV IRMSGPDAIT IGKKVFRPKY NKEWYQKDNY KIIYGHVINP
ETGEIIDEVL LSIMRGPKSF TAEDVIEISC HGGIIPLRKV LEVILRNGAR HAEPGEFSKR
SFLNGRLDLA QAESIIDIIR AKTDAGAKIA VNQLGGKLSE KVNGLQHKVL GLLAKIEAII
DFPEDDIPEE NLLGISKECN SLIKEIEHLL AYADTGKIYR EGLKTVIVGK PNVGKSSLLN
ALLHEQRAIV TDIPGTTRDV IEEILSIKGV PLKIIDTAGL RETQDLVEKI GVEKSRELLN
QADIVLFVLD ATTGISDEDR KVIDLIKDKK VLILINKIDI TKNKIDSHEI RQLINFSEII
EISAQKEIGL DKLEETIFNM VVEGKITTTD SIFVSNSRHK HALERAMQHL LEASKGLQEY
VPADLVSIDL KSSWEILGEI TGNSVTEDLI DRIFSDFCIG K
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