Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3290 |
Symbol | |
ID | 4957792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3568523 |
End bp | 3570307 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640182476 |
Product | hydrogenases, Fe-only |
Protein accession | YP_001114615 |
Protein GI | 134301119 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGATA ACCAGGATAA TCATGAAAAT AAAAGAAAGA TACATGTCAG TATCAATGAC CAGGAGTTGA CTGTACCCGA AGGAATAACC ATTCTAGAGG CAGCCCATGA AGCGGGTGTC AAAATCCCTA CTTTGTGCCA TCTAGACCTG CATGACTTTC AATTATACAA TAAAACTGCT TCCTGCAGAG TGTGTATGGT GGAACTGGTA GATGCAAGGA ATAATCGAAA TAAACTAGTA CCCTCCTGTG TTACCAAAGT ACAAGAGGGA ATGATGGTAC GGACCGACAC CATCCGGGCT ATCCAAGCTA GAAGAATGGC AGTGGAACTG CTTTTATCCA ACCACCCTAA TGAATGTTTC ACATGTCCCA AAAACCTGGA ATGTGAGCTG CAGGCCCTTG CAGATGAACT GAATGTAAGA AAGATTCGTT GGGAAGGTGA AAGGATGGAC TATCCTAAGG ATATGTCCAG CGATGCTATT GTTAAGGATG CCAACAAGTG TATCTATTGC AGGCGCTGTG AGACTGCATG CAATGAGGTG CAGACCTGTG GAATTCTTTC AGGCATCGGA CGTGGCTTTA ATGCTTTTGT TGGTCCCTTT GCCAATATCC CCATGGTGGA GTCTTCTTGT ACCTACTGCG GACAATGCGT AATGGTTTGT CCCACAGCAG CCCTTACCGA GGTCTATCAC ACCGATAAGG TTTGGGAAGC CATCAATGAT CCTGATAAGC ATGTGATAGT CCAAACTGCC CCTGCAGTAC GTGTTGCACT GGGAGAACTT TTCGGCATGG AAGCCGGGAC CGTTGTTACT GGTAAAATGG TAACTGCTCT CAAACGTATG GGATTTGATG AAGTATTTGA TACGGATTTT GGAGCAGACC TTACTATAAT GGAGGAGGCA TCGGAGCTTA TTTATCGCCT CAAAAACAAT AAAACATTAC CAATACTGAC AAACTGCTGT CCCGCCTGGG TCAAGTTTAT TGAGCACCAA TTTCCAGAGT TGATTCATGT TCCTTCTACC TGTAAGTCAC CACACATTAT GTTTGGCACC ATTGCCAAAA CTTATTATGC AGAGAAAAAT GGGTTGGATC CTGACAATAT TGTGGTAGTA TCGGTGATGC CCTGTATAGC CAAAAAAGCA GAGGCAAAAC GGCCGGAACT TACGAAGGAC GCACATAACA ATGTGGATAT TGTTATTACA ACCCGTGAAT TGGGAGCTAT GATCAAGGAA GCCGGAATTG AATTTGTCAA ACTGCCGGAT AGCGAATTTG ACAGTCCACT GGGAGAATCA ACTGGTGCAT CAGTTATATT TGGTACTGCC GGGGGAGTCA TTGAAGCCGC CCTCCGTACC GCTTCTGAAT GGATGACAGG TAAACCCCTT GATAGGGTTG AGTTTGAGGA GTTAAGGGGA ATGGAAGGTG TTCGTAGGGC TACTGTAAAA ATTGGTGATC AGGAGCTTAA AATAGGAATT GCCAGCGGTC TGGGTAATGC GCGGCATATT CTAGAGGATA TTAGGGATGG AAGAGCCGAT TATCATGCCA TTGAAATCAT GGCTTGCCCC GGTGGCTGTA TTGCTGGAGG GGGACAACCT TACCACCATG GTAACCATGA GATTATCAAA AAACGCAGAG AAGCTATTTA TGAAGAGGAT AGAAGGAAAA AAGTAAGAAA ATCTCACGAA AATAAAGAGA TACTGGAGCT TTATAAGAAT TACCTGGGAG AGCCCTTTGG CAAACTGGCA CATGAACTTC TCCATACTCA TTTTGAGGAA AGAGAAAGAA TTTAG
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Protein sequence | MPDNQDNHEN KRKIHVSIND QELTVPEGIT ILEAAHEAGV KIPTLCHLDL HDFQLYNKTA SCRVCMVELV DARNNRNKLV PSCVTKVQEG MMVRTDTIRA IQARRMAVEL LLSNHPNECF TCPKNLECEL QALADELNVR KIRWEGERMD YPKDMSSDAI VKDANKCIYC RRCETACNEV QTCGILSGIG RGFNAFVGPF ANIPMVESSC TYCGQCVMVC PTAALTEVYH TDKVWEAIND PDKHVIVQTA PAVRVALGEL FGMEAGTVVT GKMVTALKRM GFDEVFDTDF GADLTIMEEA SELIYRLKNN KTLPILTNCC PAWVKFIEHQ FPELIHVPST CKSPHIMFGT IAKTYYAEKN GLDPDNIVVV SVMPCIAKKA EAKRPELTKD AHNNVDIVIT TRELGAMIKE AGIEFVKLPD SEFDSPLGES TGASVIFGTA GGVIEAALRT ASEWMTGKPL DRVEFEELRG MEGVRRATVK IGDQELKIGI ASGLGNARHI LEDIRDGRAD YHAIEIMACP GGCIAGGGQP YHHGNHEIIK KRREAIYEED RRKKVRKSHE NKEILELYKN YLGEPFGKLA HELLHTHFEE RERI
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