Gene Dred_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3288 
Symbol 
ID4957766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3566858 
End bp3567772 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content38% 
IMG OID640182474 
Productcholine/ethanolamine kinase 
Protein accessionYP_001114613 
Protein GI134301117 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATGG AAGAATTAGT CCAAGAAAAG CTGTGCCAGG CTTTTCACGA TGAAAGCATT 
GTATTCGACA AATCCCGCTT TGCCGGGGGA CTTACCAATT ACAACTACAT AATGAACATT
AAGGGCATCG AATATGTTGT TAGACAACCC GGTGGCATGA CGGAACAGAT TATTGATCGG
AAAATTGAAA GGGTCAATAA TAATATTGCC TCAGAGTTCG GCGTGAACTC TGATTGCATT
TACTTTGACG AAAATAGCGG AGTCAAAATA AGCATACACA TAAAAAATAG CCAAAACATG
GCTCAGGCTG ATCCTAGTTC CCCACAAAAC CTGGAATCTG TTTCCGATAT AATGAAAAAA
ATACATTCAT TCCCAAAACA TTTTTTAAAC TGTTTTGATT GGCAAACAGA ATTGTCTAAA
TACGAACGGA TTATCCAACA ACAACGTGGC GACTTTTTCT TTGATTACAC AACCCTAAAG
GAACAATTAA TCACTTTTGT CCAAAAAAAC ATTAAAAGTA CAATCTTAGC CCCCTGTCAC
AATGACACAG TACCTGAAAA CTTTATTATT GACGACACCG GCAGAACATA TCTTATAGAC
TGGGAATATT CTGGAATGAA CGATCCCTGT TGGGATGTGG CAGCCTACAT TCTTGAATCC
AAACTATCAG TAGAAGCTAT CAACCATTTA ATTCAGAGCT ACTTCAGCCA TCCACTGACC
CCTACGGAAG AATTAAAAAT AAAAAGCTTT ATGATGGCAC AAGATTTACT CTGGACAGCC
TGGGCTTTAA TCAGACATTA CAATGGCGAT GACTTTCTTG AATACTGCTG TATTAGATAT
GAACGCTTTC GGAAAAACAT CAAAGCAATG ACCAAATCAC CCCATTGTTC CATTGCCAAC
ATGGTCATGA GTTAA
 
Protein sequence
MRMEELVQEK LCQAFHDESI VFDKSRFAGG LTNYNYIMNI KGIEYVVRQP GGMTEQIIDR 
KIERVNNNIA SEFGVNSDCI YFDENSGVKI SIHIKNSQNM AQADPSSPQN LESVSDIMKK
IHSFPKHFLN CFDWQTELSK YERIIQQQRG DFFFDYTTLK EQLITFVQKN IKSTILAPCH
NDTVPENFII DDTGRTYLID WEYSGMNDPC WDVAAYILES KLSVEAINHL IQSYFSHPLT
PTEELKIKSF MMAQDLLWTA WALIRHYNGD DFLEYCCIRY ERFRKNIKAM TKSPHCSIAN
MVMS