Gene Dred_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3236 
Symbol 
ID4957478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3518418 
End bp3519218 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content37% 
IMG OID640182424 
ProductAAA ATPase 
Protein accessionYP_001114563 
Protein GI134301067 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAC AATTCTTTGG ACTTAAGTTT AACCCTTTTT CTAAAGAAGT ACCGGCGGAC 
AAATTATTTA TTAGCCAAGA CTTATTGGAA CTAGAATCGA GGTTAAAATA TTTGCAAAGT
ACCCGTGGAA TCGGGTTAGT TGCAGGTGAA CCAGGTGCTG GCAAATCAAC AGCTTTGAGA
AAATTTGTTA ATGAGTTAAA CCCAGCTCTC TACAAGCATT GTTATTTTTC TTTGGCGACT
GTTACTGTGT TGGAATTTTA TCAGGGACTT GCCTTAGAAC TTGGTGAGCA ACCTAAACAC
AAAAAGGTAG CTATTTTCCG TCAAATTCAG GGCGCTATCA ATTCTATGTA CTATGAACGC
CGGATTACGC CGGTAATTAT CTTAGATGAA ATACATTTAG CTTCAAACAA GTTGTTAGAG
GATTTAAGGC TCATTTTTAA CTTTAAAATG GACTCGCAAA ATCCCTTTAT TCTTGTCTTA
GCAGGACAAC CTTTAATTCG ATCTAAGTTA TCACTCAACA TCAATAACCC ACTAAGGCAA
CGTTTGGTAG TGAAACATAT TATGCAGGGG TTAAAACCTG AAGAAATTAG AGATTATTGC
ACCAGCCGAT TAAAGCAAGC AGGGTTAATC GAAGAGATTT TCACCGATTC AGCAATTGAC
GCTATCTATG CCACAACAAA AGGCTTACCA CGGTTAATTA ACAATTTAGT TACTAATTGT
CTGCTTTACG CTTATTACAA AAAGTTAAGG CAAATTGATG AAGAGGTAGT TTACCAGGCC
CAAAATGAAC TTAATATTTG A
 
Protein sequence
MFTQFFGLKF NPFSKEVPAD KLFISQDLLE LESRLKYLQS TRGIGLVAGE PGAGKSTALR 
KFVNELNPAL YKHCYFSLAT VTVLEFYQGL ALELGEQPKH KKVAIFRQIQ GAINSMYYER
RITPVIILDE IHLASNKLLE DLRLIFNFKM DSQNPFILVL AGQPLIRSKL SLNINNPLRQ
RLVVKHIMQG LKPEEIRDYC TSRLKQAGLI EEIFTDSAID AIYATTKGLP RLINNLVTNC
LLYAYYKKLR QIDEEVVYQA QNELNI