Gene Dred_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3192 
Symbol 
ID4957302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3473428 
End bp3474627 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID640182380 
Productaminotransferase, class I and II 
Protein accessionYP_001114519 
Protein GI134301023 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.593441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAACA ACAAATGGAG TGACTATATT AACCCCTCGG TAAAAAGGAT ACCACCTTCG 
GGCATCCGAA AGTTTTTTGA CCTAGCTGCA GAAATGGAAG GGGTTATCTC CCTGGGGGTA
GGGGAACCGG ATTTTGTTAC ACCCTGGCAT ATTCGGGAGG CCTGTGTTTA CTCCTTAAAT
AGGGGCAGAA CAAGTTACAC CAGTAACCAA GGGTTATTGG AACTACGGGA AGAGATTGCC
CAATACTTGG GGAGTCAGAG GGTCCATTAT GACCCCAAAA AGGAAGTCCT AGTAACTGTT
GGGGTTAGTG AAGCGTTGGA TATAGCCTTG CGCACCTTGA TTATCCCAGG GGACGAAGTA
ATCATACCCA CGCCTTGTTA TGTTTCCTAT ATTCCCTGCA CTGCTTTGGC TGGAGGAATA
CCAGTTACGG TACAAACCAG TATGGAAGAT AATTTCCGTC TTACGGCGGA TAAATTGGAA
GCGGTAATCA CGCCAAAGTC AAAGGTGCTG CTGCTGTGTT TCCCCAATAA CCCAACTGGT
GCGATCATGG ATCGAGAGAC CCTGCTGCAA ATTGCGGAAT TAGTAGAAAA ACATGATCTG
TTGGTTATTG CCGATGAAAT TTACGAACGT CTTACCTATA ACGGGCAGCA TACCTGTTTT
GCTTCGTTGC CGGGCATGAG AGATCGCACC ATCATATTAA ATGGTTTCTC CAAGGCATAT
GCCATGACTG GCTGGCGGTT AGGTTATGCA GCTGGCCATG AAGACTTTAT TGCTGCCATG
AACAAAATCC ACCAATATAC AATGCTCTGC GCACCCATCA CGGCACAAGT TGCTGCCCTG
GAAGCCCTGC GGAATGGCAA GAGTGCTGTG GATAAAATGG TAGCTCAGTA TAATCGTCGT
CGTAGATTGG TACTTCATGG TTTTAAAGAA ATTGGTTTGA CCTGCTTTGA ACCCGGAGGA
GCCTTCTATG CCTTCCCCTA TGTGGGAGAT ACCGGATTAA CTGCTGCTGA ATTTGCTGAA
AACCTGCTGC TGGAGGAAAA AGTAGCCGTG GTACCTGGCG ATGTTTTTGG ACCCGGCGGA
GAAGGATGCA TTCGCTGTTC CTATGCCTCA TCCGTCGAGG ACCTAACCGA GGCCATCAAA
AGAATGGGCA GGTTTATCAA ACACCGTGGC ATGAAAAAGG TTAAAACGGT ATATAGTTAA
 
Protein sequence
MSNNKWSDYI NPSVKRIPPS GIRKFFDLAA EMEGVISLGV GEPDFVTPWH IREACVYSLN 
RGRTSYTSNQ GLLELREEIA QYLGSQRVHY DPKKEVLVTV GVSEALDIAL RTLIIPGDEV
IIPTPCYVSY IPCTALAGGI PVTVQTSMED NFRLTADKLE AVITPKSKVL LLCFPNNPTG
AIMDRETLLQ IAELVEKHDL LVIADEIYER LTYNGQHTCF ASLPGMRDRT IILNGFSKAY
AMTGWRLGYA AGHEDFIAAM NKIHQYTMLC APITAQVAAL EALRNGKSAV DKMVAQYNRR
RRLVLHGFKE IGLTCFEPGG AFYAFPYVGD TGLTAAEFAE NLLLEEKVAV VPGDVFGPGG
EGCIRCSYAS SVEDLTEAIK RMGRFIKHRG MKKVKTVYS