Gene Dred_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3176 
Symbol 
ID4957225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3456100 
End bp3456954 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID640182364 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_001114503 
Protein GI134301007 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01859] fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00142497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTAG TTCCTGTAAA AGAATTACTT GCAAGGGCGG AAGAGGGAAA GTACGCTGTA 
GGTGCCTTTA ATGTTAATAA CATGGAAATT GTTCAAGCTA TTTTAGCTGC CGCAGAGGCA
GAACGGGCAC CGGTTATTAT GCAAGCTAGC CAGGGCGCCA TTAAATATGC AGGTATTCAA
TACATCCATG GCTTGGCCCT TATAGCAGCC AGCCAATCCA CTGTACCCAT TGCCCTGCAC
CTGGATCACG GCACTAGCTT TGAACAATGT ATGCAGTGTA TCCGGGTTGG CTTTACCTCG
GTGATGATTG ATGGCTCTAA ATTGCCGTTG GAAGAAAATA TTGCTCTTAC CAACAAGGTT
ATTGAAGTGG CCCGGGCCAC CGGTGTTTCT GTTGAGGCAG AATTGGGTAA AATCGGCGGC
ACCGAGGATG ATATTCATGT TGATGAAAGA GATGCTTTCT TTACTGATCC TGAAGAGGCA
CGCTATTTTG TAGAAAAAAC CGGCGTAGAT GCGCTGGCAA TTTCCATTGG TACTGCCCAT
GGGCAATACA AAGGTGTTCC TAAACTGGAT TTTGCCCGCC TGGAGAAGAT TGCTGGCATG
ATTGATACCC CCATTGTTTT GCATGGTTCC TCAGGCGTTC CCACTGAAGC CATTCAAGAG
GCCATTCGTC TGGGTGTGCG TAAAGTAAAT ATTGATACCA ACATCCGCGA GGCCTTTACC
GGTGGTTGCC GACAAGCCTT GGAGAACAAT GCCAAAGAAA TTGATCCCCG TAAAGTATTA
GCCCCGGCCA GAGAGGCTGC CACACAGGTA ATCCGTGAGA AAATTCGGGC ATTTGGTAGT
TCCGGTCGGG CATAA
 
Protein sequence
MPLVPVKELL ARAEEGKYAV GAFNVNNMEI VQAILAAAEA ERAPVIMQAS QGAIKYAGIQ 
YIHGLALIAA SQSTVPIALH LDHGTSFEQC MQCIRVGFTS VMIDGSKLPL EENIALTNKV
IEVARATGVS VEAELGKIGG TEDDIHVDER DAFFTDPEEA RYFVEKTGVD ALAISIGTAH
GQYKGVPKLD FARLEKIAGM IDTPIVLHGS SGVPTEAIQE AIRLGVRKVN IDTNIREAFT
GGCRQALENN AKEIDPRKVL APAREAATQV IREKIRAFGS SGRA