Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3175 |
Symbol | |
ID | 4957224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3455369 |
End bp | 3456019 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640182363 |
Product | putative transaldolase |
Protein accession | YP_001114502 |
Protein GI | 134301006 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000196987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTTT TTATCGATAC TGCAAATGTA GATGAAATTC GGGCTGCCAA TGCCCTGGGT GTCATTGCTG GCGTAACCAC CAATCCCTCT CTGATTGCCC GAGAAGGACG TGATTTTGCG GAAGTTGTAA AAGAAATAAC CTCCATTGTT GACGGTCCCA TCAGTGCAGA AGTGATTAGC TTGGATGCCG AAGGTATGAT GAAAGAAGCT GTGGAACTTG CAGCCATTCA CCCCAATATT GTTATCAAAA TACCAATGAC CACCGAGGGA TTAAAAGCAA CCCGGGCCTG TATGGAAAAG GGCATTAAAA CCAATGTTAC CCTAATCTTT TCTGCTAATC AGGCGCTATT GGCTGCCAGG GCAGGTGCTA CCTATGTTAG TCCCTTTGTG GGACGCTTAG ATGATATTGG CCAGGATGGG ATTGGCTTGA TCTACGATAT AGCAGATATC TTTAACAATT ATGATCTTGC TACCCAAATT ATCTCAGCCA GTATTCGTCA CCCGTTACAC GTTCAGCAAT CCGCCAAGGC CGGGGCCCAC ATAGCCACAG TACCTTATAA AGTATTGCTG CAAATGGCCA AACATCCCTT AACAGATAAG GGAATTGATG CCTTCCTTGC CGACTGGGCA AAGCTTACCC CAAAAGCCTA A
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Protein sequence | MLLFIDTANV DEIRAANALG VIAGVTTNPS LIAREGRDFA EVVKEITSIV DGPISAEVIS LDAEGMMKEA VELAAIHPNI VIKIPMTTEG LKATRACMEK GIKTNVTLIF SANQALLAAR AGATYVSPFV GRLDDIGQDG IGLIYDIADI FNNYDLATQI ISASIRHPLH VQQSAKAGAH IATVPYKVLL QMAKHPLTDK GIDAFLADWA KLTPKA
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