| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3163 |
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| Symbol | |
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| ID | 4957189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3442698 |
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| End bp | 3443156 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640182351 |
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| Product | RpiB/LacA/LacB family sugar-phosphate isomerase |
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| Protein accession | YP_001114490 |
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| Protein GI | 134300994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000204659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAACA TATCAATAGT ACTGGGAAGC GATCATGCAG GTTTCGAAAT GAAAGAACAA
ATAAAGGAAT ATTTGCAAGG TCAGGGGCAC ACAGTGCAGG ACATGGGTTG TAACGGCACC
GAATCCTGTG ACTACCCGGA TTTTGCTCTG GCTGTGGGAG AAAAAATTCG CTCTGGCCAA
TGTCAGCAGG GCATTCTCAT CTGTGGTACC GGTGTGGGTA TGGCCATTGC CGTAAACAAG
GTACCTGGTG TACGGGCGGC TAACGTTTTT GCACCGGAAA TTGCGCAACT GGCCCGGGAA
CACAACAACG CCAACGTCCT CACCATGGGA TCAAGATTTA TCGACCTAGC CCAGGCCAAG
GCTATCGTGG AAAAATTTAT CAACACTGAA TTTGCCGGCG ATCGCCACGC CAAACGGGTG
GACAAGATTA GTGCTATTGA GAAAAAGTAT AGCTTATAG
|
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| Protein sequence | MKNISIVLGS DHAGFEMKEQ IKEYLQGQGH TVQDMGCNGT ESCDYPDFAL AVGEKIRSGQ
CQQGILICGT GVGMAIAVNK VPGVRAANVF APEIAQLARE HNNANVLTMG SRFIDLAQAK
AIVEKFINTE FAGDRHAKRV DKISAIEKKY SL
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