Gene Dred_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3141 
Symbol 
ID4957091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3420805 
End bp3421884 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content37% 
IMG OID640182329 
Producthypothetical protein 
Protein accessionYP_001114468 
Protein GI134300972 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAAAAA AAATATTTAT TCTTATGGTT AGCATGATAT CAATTATGCT CCAAGCTATG 
CCTTCCTATG CGCAACAAAC AGTAGACAAA CTAACGTTGC AACAGGCTAC CCAAAAGGCT
TTTATTTATA ACACACAAAT AAAAAATACC GAATTAGACA TGGAAAAGTT GGATATAACC
CGTGATAATA TAAAATGGTC CATGAATGGG ATAATGTCTG GGTATAACAT ACCAGAACAA
CAGGATAGAG AAATTCACAA AGTATATTTT GAAACTGATT TAGGCTACCG TTCCACTGAA
AAATTGCTGG ATAATCAAAA AAGACAACTA GTAATTGATG TCAAAGAAGC CTATTACAAC
GTTCTTTTAG CAAAGAAGGA TCTGGCAACT GCACACCAGA AGCTTGCCGT ATCATTGATT
AAACACTCCC AGGTGGTTTC TAAGTATGAA GTCGGCATGG CTACTCAAAT GGATGTACTT
ACTGCTGAAA GCACCTTAAA AGAAGACAAA GCAGCCATTG AAGAAAAGAC CAACACACTT
ACGAAAGCCT ATAGTAATTT AAATAAGTTA ATGGGAAATA ATCAAGAAGC ACGTCCAGAA
CTCGTGGATA CAGTTGCCTT TACACCCATA GAAAATCTAG ATGTAGATAC AATGGTGTTA
AGGTCAGTAA ACAATTCCTT TGAAGTGTGG GCTAAAAAAG AGAAAGCAAA AAAGGAAAGT
AATGCAAAGT ATTACGAGGA TTCTTACGAT ATCGGGGAAT ATACCGAATC CCAGGCCCAG
AATGAGGTTA GGGATACAGA AGAAAGTATT CGTCTTTTAG CAAAAGCCTA TTGTTTGGAT
ATTTTGGATA AACAAACTAA GTATATGCAA TACGAAGTAA AAGAAAAACA GCTCCAAGAG
ACCCTGAAAG TAGTCAAAGC CAAGTATGAA GTTGGCATGG CCACAAAAGA TGTGGTAGAT
GAAGTAGCGT ATTCCTTAGG TCAGCTACAA GTAGCTAAAT TATCCACAGC GGTCTCACAT
ACTGTTACTG TTGATAAACT TCAAAAATTA ACTGGTGAGT TAAACCCTGT TATAAAGTAA
 
Protein sequence
MRKKIFILMV SMISIMLQAM PSYAQQTVDK LTLQQATQKA FIYNTQIKNT ELDMEKLDIT 
RDNIKWSMNG IMSGYNIPEQ QDREIHKVYF ETDLGYRSTE KLLDNQKRQL VIDVKEAYYN
VLLAKKDLAT AHQKLAVSLI KHSQVVSKYE VGMATQMDVL TAESTLKEDK AAIEEKTNTL
TKAYSNLNKL MGNNQEARPE LVDTVAFTPI ENLDVDTMVL RSVNNSFEVW AKKEKAKKES
NAKYYEDSYD IGEYTESQAQ NEVRDTEESI RLLAKAYCLD ILDKQTKYMQ YEVKEKQLQE
TLKVVKAKYE VGMATKDVVD EVAYSLGQLQ VAKLSTAVSH TVTVDKLQKL TGELNPVIK