Gene Dred_3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3137 
Symbol 
ID4957073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3415174 
End bp3416694 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content37% 
IMG OID640182325 
Productundecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_001114464 
Protein GI134300968 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGGG GTCCAGCAGT AAAACCATCA ATGGATGTTC CCTATCAGTA TGAATCAAGA 
ACAATGAAAT CATTTACAAC GGCAAAAACC CTTATAGCTG TCCCTGCACT GGTTATATTA
GACGTATTGG CCATAGGCTT TAGTCTTTTA ACTGCCTATA TACTTAGAAT AAACTTTTTG
CCAATAATAC TTCCGGGGTT GTTTAAGCCC GAGTTGTTAA ACGATACTAT CGTTAACCTA
TGGTGGCTAC CCTTAGTATT AATCGTCTGT ATGGCCTATG AGGACCTATA TCAGAAAAGA
CTTCCCTACT GGAAGGAAGT CGAAAAAATT CTTAAGTCCT CGACCTTGGC AGTGACATTA
GCCATTTCTT TTCTTTACAT GGCCAAACTA AGTGCAGAAA TATCCAGAAC TTTAGTTATC
ATGTCTTGGT TAATTAGTAT TTTGTATATA CCTTTACTTA GGTATTTAGG TAAAAAATTA
TTGGTTAGGC TTGGGGTTTG GAGTAAACCC GTTTTAATTG TTGGCGCAGG TAAGACTGGA
GAATTGGTTC TTAAGGCATT AACACGTGAG TATACCATGG GCTATCAGTC CATAGGTTTT
TTGGATGATA ATAAAGAGTT AATCAATATT CATGAATCTA AGTCAGGATT AAGAATACCT
ATATTAGGTA ATTTTGAAGA TGCAGAAGAA CTTATTGCTA AAACAAAGGT CCAAGATGTT
ATTGTCGCAG CCCCAGGGCT ACCGCCTAAA GAATTGGTTA CTTTAACTAA CAGGCTGCAG
CCACTGGTTA ATAATGTTAT GGTAGTACCG GATCTTTTTG GCTTATCCAT GAACGGAATT
GAAGTTGAAT ATTTCTTTGA TGAACAAACC CTGTTACTGA ATATTAAGAA TAAGTTAAGA
TCTGCCCTCA ACAGAGGTAT TAAGCGTGCC TTTGATATTG TTACAGGAAC TATCATTTCA
GTTCTCTGCA TTCCAATTTT GGTTATCCTA GCAGTATTAA TAAAAGTTGA CTCTCGGGGA
CCCGCTTTCT TTAAACAAGA AAGATTGGGA CAAAATGGTG AAACTTTTAT ATGCTACAAG
TTCCGCACCA TGTATTTGGC AGGGGATAAG ATACTAAAAA GTTATCTCAA GGCAAATAAG
GACGCCCGAG AGGAGTGGCA GACTTATAAC AAATTAAAGG GAAATGATCC CAGAGTAACC
AGGGTTGGTT GCTTTTTAAG AAAATACAGC TTAGATGAAT TACCCCAATT AATTAATGTA
ATTCTTGGTG ATATGAGTCT AGTAGGACCA AGACCCTATT TGATTAGGGA AAAGAACCAG
ATGGGGGATT GGATTCATGA CATACTAGTA GCAAAACCAG GAATAACAGG TCTATGGCAA
GTTAGTGGAC GGAACCTTAT TGAATTTGAA GGAAGACTTA AATTAGATAC CTGGTATGTT
AGGAATTGGT CAATTTGGTT GGATATAGTA CTTCTTCTAA AGACAATTCG AGTTGTTATA
AAACGAGAGG GAGCTTATTA A
 
Protein sequence
MSGGPAVKPS MDVPYQYESR TMKSFTTAKT LIAVPALVIL DVLAIGFSLL TAYILRINFL 
PIILPGLFKP ELLNDTIVNL WWLPLVLIVC MAYEDLYQKR LPYWKEVEKI LKSSTLAVTL
AISFLYMAKL SAEISRTLVI MSWLISILYI PLLRYLGKKL LVRLGVWSKP VLIVGAGKTG
ELVLKALTRE YTMGYQSIGF LDDNKELINI HESKSGLRIP ILGNFEDAEE LIAKTKVQDV
IVAAPGLPPK ELVTLTNRLQ PLVNNVMVVP DLFGLSMNGI EVEYFFDEQT LLLNIKNKLR
SALNRGIKRA FDIVTGTIIS VLCIPILVIL AVLIKVDSRG PAFFKQERLG QNGETFICYK
FRTMYLAGDK ILKSYLKANK DAREEWQTYN KLKGNDPRVT RVGCFLRKYS LDELPQLINV
ILGDMSLVGP RPYLIREKNQ MGDWIHDILV AKPGITGLWQ VSGRNLIEFE GRLKLDTWYV
RNWSIWLDIV LLLKTIRVVI KREGAY