Gene Dred_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3123 
Symbol 
ID4957016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3398764 
End bp3399522 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content40% 
IMG OID640182311 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001114450 
Protein GI134300954 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTAA AAACAATGAC TAACGAAAAT ACAATATCAA AATTAAATGA TATGCGTTTA 
ACTGCAATGG CCGAAACCTA CAGGAAACAG TTGCATGATA CCGATTACCG GGAACTATCC
TTTGAAGATC GCTTCAGCCT TCTTGTGGAT GTGGAATGGT CACGGAGAAA GAATAATAAG
CTGAACCTCC TGATTAAAGG ATCACAATTC CGGTACAACC AAGCATGTAT TGAGGATATA
GAATATCATC CAGATAGAAA GCTTGATAAA GCTCAAATTC TCCGGTTGGC TTCAGGTCAG
TATATTCAAG ATCACCACAA TATCATTATT ATGGGTGCTT CAGGTAACGG CAAAACCTAT
CTAGCTTGCG CCTTTGGAGT TGCTGCATGC CGGCAATTCT ACAAAGTTAG GTATGTACGG
CTACCTGATC TACTTGATGA ATTAACAATC GCCAGAGGTG AGGGCATATT CCAAAAGGTT
ATCAAGCAAT ACAAGAAAGT TAATCTCCTT ATACTAGATG AATGGCTTCT AACACCTTTA
AAGGGGAGCG AGGCACGGGA CCTTCTGGAA ATAGTGGAGT CAAGACATCA GACAGGTTCA
ACCATTTTTT GTTCCCAGTT TGATCCTAGA GGGTGGCATG AAAAAATAGG TGAGGTAACC
TTGGCAGATT CCATTTTAGA CCGTATTGTC CATGATTCCT ATACTATTCT GATTGATGGG
GAGATATCTA TGAGAGAACG ACATGGTTTA GAAAAATAA
 
Protein sequence
MEVKTMTNEN TISKLNDMRL TAMAETYRKQ LHDTDYRELS FEDRFSLLVD VEWSRRKNNK 
LNLLIKGSQF RYNQACIEDI EYHPDRKLDK AQILRLASGQ YIQDHHNIII MGASGNGKTY
LACAFGVAAC RQFYKVRYVR LPDLLDELTI ARGEGIFQKV IKQYKKVNLL ILDEWLLTPL
KGSEARDLLE IVESRHQTGS TIFCSQFDPR GWHEKIGEVT LADSILDRIV HDSYTILIDG
EISMRERHGL EK