| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3066 |
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| Symbol | |
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| ID | 4958545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3330759 |
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| End bp | 3332777 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640182254 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001114393 |
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| Protein GI | 134300897 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000537997 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTA AGTTGAAGTC TGACTTTAGC CCCCGGGGCG ATCAGCCCAG GGCCATTGAA
AAACTGGTGG CAGGCATTGA TAAGGGCTTG AGACACCAGG TACTATTGGG GGCCACCGGT
ACAGGGAAAA CCTTTACCAT GGCCAACATC ATTCAAGAGG TTAAGCGCCC CACCTTAATA
TTAGCACCCA ACAAAACCCT GGCAGCCCAG CTGTGTAGTG AGATGAAAGA ATTTTTCCCG
GAAAACTCCG TTGAATATTT CGTTAGTTAC TTTGATTACT ACCAGCCCGA GGCCTACATT
CCCCATACCG ATACCTATAT TGAAAAGGAT TCATCACTGA ACGACGAAAT TGATAAACTG
CGTCACTCAG CAACCACTGC GCTGTTGGAG CGGCGGGATG TAATTATTGT AGCCAGTGTT
TCCTGCATTT ACGGTTTAGG TAACCCAGAA ACCTACCGGG ATCTGGTCCT ATCCCTGCGG
GTGGGCGGTA CCTACGACCG GGATGCCATC CTGCGCAAGC TGGTAGATAT TCAATATGAA
AGAAACGACA TTGACTTTAG CCGGGGTAAG TTCCGGGTAC GGGGCGATGT CATTGAAATT
TTTCCCGCCA ACGCCAGTGA AAGGGCCCTG CGGGTGGAAT TGTTTGGAGA TGAAGTGGAC
CGTCTGTTGG AAATCGATGT TGTCACCGGT GAAATTCTGG GTCAACGCCA ACATATTGCT
GTTTTCCCTG CCAGCCACTT CGTAACTGCC GAAGATAACA TGAAAAGAGC CATTACCACC
ATTGAGGCAG AGCTGGAGCA GAGGCTACAG GAATTGCGGG CTGCCGATAA ATTATTGGAA
GCCCAACGCC TGCAGCAGCG TACCCAATAT GACCTGGAAA TGATGGCTGA AGTGGGTTTT
TGTTCGGGCA TTGAGAACTA TTCCAGGCAT CTCACAGGAC GTGCCCCCGG AGAGTCACCC
TTTACCCTGC TGGACTTCTT TCCCGAAGAC TGGCTGTTAA TCATCGATGA GTCCCACGTG
GCAGTACCAC AGATTGGTGG TATGTACGAA GGGGACCGTT CAAGAAAAAC AACCCTAGTG
GAGCACGGCT TTCGCCTGCC CTCAGCCCTG GATAACCGAC CCTTGAAGTT CAAAGAATTC
GAAGAAAAAG TCAATCAAGT GATTTATGTA TCGGCCACAC CGGGTAAATA CGAATTTGAA
CACCAAGAGC AAATCGTGGA ACAGATTATT CGTCCCACCG GATTGATAGA CCCTGAAATA
TTTATCAGGC CCACCAAGGG GCAAATTGAT GATTTATTGG GAGAAATTCG CCTGCGGGTA
GAGCGGGACG AAAGGGTGCT GGTAACCACC CTAACGAAAA AAATGGCCGA AGACCTCACC
GACTACTTTA AAGAAAATGG CGTGCGGGTT CGTTACCTGC ACTCGGATAT TCATACCATG
GAGCGGATGG AAATCCTGCG GGATCTGCGC CTGGGTACCT TTGATGTCCT GGTGGGCATT
AACCTGCTGA GGGAGGGCTT AGACCTACCG GAAGTAAGCC TGGTGGCCAT TCTGGATGCC
GATAAAGAAG GCTATCTTCG TTCCGAACGC TCTCTGATCC AGACCATCGG CCGGGCTGCC
CGTAATGCAG AGGGCCGGGT GATCATGTAT GCAGACAAAA TGACCGACTC CATGAAGAAA
GCCATCGGAG AAACAAACCG ACGCCGCAAG ATTCAAATGG AGTATAACCG TAAACATAAT
ATTACCCCGG AAACCATTCG CAAGGCCATC AGGGATGTCA TTGAAGCCAC CCGGGCGGCT
GAAGAAAAAG CACCCTATGT GGCCCAGAGC AAGGCGGGTA AGCTAACAAA AACCGAGCTG
AAGAAGATGA TTGCTAAGCT GGAGAAAGAA ATGAAAGAAT CCGCCAAGCA CCTGGAATTT
GAGCGGGCAG CCCAGCTTAG AGATGCCCTG ATTGAGCTAC GGCTGCAGCT TAGGGGAGAG
AAGAACATCA AGCCAGCAAT ACCGGAGATA GAGTATTAG
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| Protein sequence | MEFKLKSDFS PRGDQPRAIE KLVAGIDKGL RHQVLLGATG TGKTFTMANI IQEVKRPTLI
LAPNKTLAAQ LCSEMKEFFP ENSVEYFVSY FDYYQPEAYI PHTDTYIEKD SSLNDEIDKL
RHSATTALLE RRDVIIVASV SCIYGLGNPE TYRDLVLSLR VGGTYDRDAI LRKLVDIQYE
RNDIDFSRGK FRVRGDVIEI FPANASERAL RVELFGDEVD RLLEIDVVTG EILGQRQHIA
VFPASHFVTA EDNMKRAITT IEAELEQRLQ ELRAADKLLE AQRLQQRTQY DLEMMAEVGF
CSGIENYSRH LTGRAPGESP FTLLDFFPED WLLIIDESHV AVPQIGGMYE GDRSRKTTLV
EHGFRLPSAL DNRPLKFKEF EEKVNQVIYV SATPGKYEFE HQEQIVEQII RPTGLIDPEI
FIRPTKGQID DLLGEIRLRV ERDERVLVTT LTKKMAEDLT DYFKENGVRV RYLHSDIHTM
ERMEILRDLR LGTFDVLVGI NLLREGLDLP EVSLVAILDA DKEGYLRSER SLIQTIGRAA
RNAEGRVIMY ADKMTDSMKK AIGETNRRRK IQMEYNRKHN ITPETIRKAI RDVIEATRAA
EEKAPYVAQS KAGKLTKTEL KKMIAKLEKE MKESAKHLEF ERAAQLRDAL IELRLQLRGE
KNIKPAIPEI EY
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