Gene Dred_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3046 
Symbol 
ID4956715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3306466 
End bp3307281 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content31% 
IMG OID640182234 
Productglycosyl transferase family protein 
Protein accessionYP_001114373 
Protein GI134300877 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGAAAT ACAGCGTACT AATGTCACTT TATACAAAGG AAAAACCCGA GTATTTAAAG 
CAAAGCATAG AAAGCATGAT TAATCAATCA GTTCCTCCAG ATGAAATTGT TATAGTTAAA
GATGGTCTAC TTACTAATGA GCTTGAAGTA GTACTAAATA GGTATAATTT GGATTATCCA
GATTTAATTA AGATTGTTGT GAGTGAAAAA AATCTAGGTT TAGGTTTAGC CCTTAATCTT
GGGCTAAGGC ATTGTAAAAA TGAATTAGTA GCAAGAATGG ATACGGATGA TATTTCTTTA
CCGGACAGAT GCGAAAAGCA ACTTAAATCA TTTTTAGAAG ACGACAAACT TGTTATAGTA
GGAACAATAG TAGATGAATT TAAACATGAT CCCACTCAGA TTATTTCTAG AAGAATTGTA
CCTTTACAAC ATAAAAAAAT TTATGAATTT GCTAAAAGAA GAAGTCCTTT TAATCATCCT
ACAGTTATGT ACAAAAAGAG TAAAGTAATA GACTGTGGTG GTTATTCTAA CTTACGACGT
AATCAAGACG TAGACTTATT CGGAAGAATG CTTTTCAAGG GCTATAGAGC AATTAATTTG
AATGAAGCCT TATTATTATT TCGATCAAAT GATGAATTAG CAAAACGCCG ACGTAGTTGG
ACTAATACTA AAAGTTATAT CTTAACCATT TATAATTTTT GGAGAATGGG GTTTTCGGGG
TTTTCTGATT TTGTATGTGT GTTTATAGCT CAACTTTTTA TGTTTGTTAG TCCTATAAGC
ATACAAAACT TTATATATAA AAATTTTTTA AGATGA
 
Protein sequence
MEKYSVLMSL YTKEKPEYLK QSIESMINQS VPPDEIVIVK DGLLTNELEV VLNRYNLDYP 
DLIKIVVSEK NLGLGLALNL GLRHCKNELV ARMDTDDISL PDRCEKQLKS FLEDDKLVIV
GTIVDEFKHD PTQIISRRIV PLQHKKIYEF AKRRSPFNHP TVMYKKSKVI DCGGYSNLRR
NQDVDLFGRM LFKGYRAINL NEALLLFRSN DELAKRRRSW TNTKSYILTI YNFWRMGFSG
FSDFVCVFIA QLFMFVSPIS IQNFIYKNFL R