Gene Dred_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3039 
Symbol 
ID4956703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3298638 
End bp3299564 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content32% 
IMG OID640182227 
Productglycosyl transferase family protein 
Protein accessionYP_001114366 
Protein GI134300870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAG TAACAGTATT ATTGTCAACC TATAACGGCC AGGCATACTT GCGTGAATTG 
TTAGATAGTG TTTTCGCACA AAAAAATGTG ATAGCTAGTA TTGTTATCAG AGATGACGGT
TCTTCAGATA ATACTGTTGA TATAATAGAA GAATATATAT CAAATGGATA TGATATTACT
TTACTAAAAG AAAGTAATGT CGGTGCTACT CGCAGCTTTC ATTTACTAAC ACAATATGTA
TATGGTCAAA AAGAGAAAAC ACCTTTTTAC GCATACTGTG ATCAGGATGA TATTTGGAAC
CCTGATAAAC TGAATGTAGC AGTAGATAAA TTACGAGCGC TATCAGAAGA TCTTCCCAAT
ATGTATTTTT CAAACTTAAT TTTATATGAT GGGAAAACCA TACGAAATGA ACTTGCATTT
GATGTGCCGT GTAATTTTGA ACCACAGAAA AAAGCTTTCG CGAGAGTTTT TACATATGGA
TGTACATGTG TTTTTAATCA AGAAGCTTTA AAAACGATTA GCTTGGCAGG TGGAGAAAAC
AAGATATATC ATGATAATTG GTTATTTGAG GTTTGCGCTT TCTTAGGAAA TACAGTATTT
GACCAATCAT CATATATTCT CTATAGGCAA CATAGCAATA ATGTTTCAGG AGAAATAAAG
AAAGGCGTTA GCCTATTCAA ATATAGGTTA TACAAACTGT TCCATATAAA AGGACAGGGA
CATCAATTTG AAGAAATAGC AATTCAAATA TTGAATTTGT ATAGTGATAA GCTAAAAGAA
AGCGACAAGA TATTTTTGAC ACATGTTAGC CGTTATAGAC ACAATATAAA ATCAAAATTT
ATACTTCTAT TTAGTCAGAG AACATGTGCG GAAGAGTTTG TGAAGACTAT CTGTGTCAAA
GGTAGAATTC TTTTGAATCA TTATTAA
 
Protein sequence
MDKVTVLLST YNGQAYLREL LDSVFAQKNV IASIVIRDDG SSDNTVDIIE EYISNGYDIT 
LLKESNVGAT RSFHLLTQYV YGQKEKTPFY AYCDQDDIWN PDKLNVAVDK LRALSEDLPN
MYFSNLILYD GKTIRNELAF DVPCNFEPQK KAFARVFTYG CTCVFNQEAL KTISLAGGEN
KIYHDNWLFE VCAFLGNTVF DQSSYILYRQ HSNNVSGEIK KGVSLFKYRL YKLFHIKGQG
HQFEEIAIQI LNLYSDKLKE SDKIFLTHVS RYRHNIKSKF ILLFSQRTCA EEFVKTICVK
GRILLNHY