Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3025 |
Symbol | |
ID | 4956633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 3283650 |
End bp | 3284744 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640182214 |
Product | integrase catalytic subunit |
Protein accession | YP_001114353 |
Protein GI | 134300857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA AATCTGTGTT TTCCTTTTTT AAAGAATGGA TTGTCATCAG TATTCAATTC ATCAGCACCT TTTTTATGAC ATCCACTGCT AAAAACTTTG AAATTATAGC CCTCAGAAGC CAGCTTTCAT TGTTTCAGCA GCAAGTAGAA AATAAAAAGA TATCAAAACC CAGATGTACA CCTGTATTTC GGCAGCTGTG GGTTTTACTA TCTAAAGTTT TTATAAACTG GAAATCCAAC TTGATCTTAG TAAAACCAGA AACTGTCATT CGCTGGCATG AAACAGCATT TAAGTTTCAT TGGAAATCTA AATCAAAGAA AACCGGGCGG CCTACAATAC CTACTGAAAC AATCAAACTT ATTAAAAAGA TTCATAAGGA GAATCCATTA CTTTCCCCTG AGAAAATACG AGAAGTCCTC ATTTCAATGA ACGTTATAAA TCCACCTGCC CCAAACACAA TAGCCAAATA CATCTCATAC ACTCGTAAAC CGCCGTCCGA GCGCCAGGTC CAATCGTGGA AAACCTTTCT TAAAAATCAT AGCAAAGAAA TATGGGCAAT GGACTTTTTT ACTGTTCCTA CCTTATTATT CAAAGTATTA TATGTTTTAA TAATTATTAA TCACGGCACC CGGAAAATTG AGCATTTTGC AGTTACCTGT AATCCAAATT TAAAGTGGCT TAAACAACAA ATCCGAAATG CTACCCCTTA CGACCATAAA CCCCAATACC TCATTCACGA TAACAATCCG GTATTTGTTT CAAAAGATTT TAAAACCTTC TTAGCTTCGT CTGGAATTAG GTCTAAAAGA ATATCTAAAC GCTCTCCCTG GCAAAATGGT ATAGCAGAGC GGTCTATTGG AATTATAAGG CAAGAACTGT TAAACTACAT CATTCCATTT AATGAAAAAC ATCTACACAG ACTGCTTAGA GAATACATAC ACGAGTACTA TAATACACAT CGCACTCATC AAGGCATAAA TGGTAAAACA CCAATACCGC TTCCTACATA TCTACCTACA AAAGCTAGTA AGACCAAACT TAAAGCAACT CCTGTTCTCG GCGGTCTATA TCACACTTAC AAGAAAGTTG CTTAA
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Protein sequence | MNIKSVFSFF KEWIVISIQF ISTFFMTSTA KNFEIIALRS QLSLFQQQVE NKKISKPRCT PVFRQLWVLL SKVFINWKSN LILVKPETVI RWHETAFKFH WKSKSKKTGR PTIPTETIKL IKKIHKENPL LSPEKIREVL ISMNVINPPA PNTIAKYISY TRKPPSERQV QSWKTFLKNH SKEIWAMDFF TVPTLLFKVL YVLIIINHGT RKIEHFAVTC NPNLKWLKQQ IRNATPYDHK PQYLIHDNNP VFVSKDFKTF LASSGIRSKR ISKRSPWQNG IAERSIGIIR QELLNYIIPF NEKHLHRLLR EYIHEYYNTH RTHQGINGKT PIPLPTYLPT KASKTKLKAT PVLGGLYHTY KKVA
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