Gene Dred_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3025 
Symbol 
ID4956633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3283650 
End bp3284744 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content36% 
IMG OID640182214 
Productintegrase catalytic subunit 
Protein accessionYP_001114353 
Protein GI134300857 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA AATCTGTGTT TTCCTTTTTT AAAGAATGGA TTGTCATCAG TATTCAATTC 
ATCAGCACCT TTTTTATGAC ATCCACTGCT AAAAACTTTG AAATTATAGC CCTCAGAAGC
CAGCTTTCAT TGTTTCAGCA GCAAGTAGAA AATAAAAAGA TATCAAAACC CAGATGTACA
CCTGTATTTC GGCAGCTGTG GGTTTTACTA TCTAAAGTTT TTATAAACTG GAAATCCAAC
TTGATCTTAG TAAAACCAGA AACTGTCATT CGCTGGCATG AAACAGCATT TAAGTTTCAT
TGGAAATCTA AATCAAAGAA AACCGGGCGG CCTACAATAC CTACTGAAAC AATCAAACTT
ATTAAAAAGA TTCATAAGGA GAATCCATTA CTTTCCCCTG AGAAAATACG AGAAGTCCTC
ATTTCAATGA ACGTTATAAA TCCACCTGCC CCAAACACAA TAGCCAAATA CATCTCATAC
ACTCGTAAAC CGCCGTCCGA GCGCCAGGTC CAATCGTGGA AAACCTTTCT TAAAAATCAT
AGCAAAGAAA TATGGGCAAT GGACTTTTTT ACTGTTCCTA CCTTATTATT CAAAGTATTA
TATGTTTTAA TAATTATTAA TCACGGCACC CGGAAAATTG AGCATTTTGC AGTTACCTGT
AATCCAAATT TAAAGTGGCT TAAACAACAA ATCCGAAATG CTACCCCTTA CGACCATAAA
CCCCAATACC TCATTCACGA TAACAATCCG GTATTTGTTT CAAAAGATTT TAAAACCTTC
TTAGCTTCGT CTGGAATTAG GTCTAAAAGA ATATCTAAAC GCTCTCCCTG GCAAAATGGT
ATAGCAGAGC GGTCTATTGG AATTATAAGG CAAGAACTGT TAAACTACAT CATTCCATTT
AATGAAAAAC ATCTACACAG ACTGCTTAGA GAATACATAC ACGAGTACTA TAATACACAT
CGCACTCATC AAGGCATAAA TGGTAAAACA CCAATACCGC TTCCTACATA TCTACCTACA
AAAGCTAGTA AGACCAAACT TAAAGCAACT CCTGTTCTCG GCGGTCTATA TCACACTTAC
AAGAAAGTTG CTTAA
 
Protein sequence
MNIKSVFSFF KEWIVISIQF ISTFFMTSTA KNFEIIALRS QLSLFQQQVE NKKISKPRCT 
PVFRQLWVLL SKVFINWKSN LILVKPETVI RWHETAFKFH WKSKSKKTGR PTIPTETIKL
IKKIHKENPL LSPEKIREVL ISMNVINPPA PNTIAKYISY TRKPPSERQV QSWKTFLKNH
SKEIWAMDFF TVPTLLFKVL YVLIIINHGT RKIEHFAVTC NPNLKWLKQQ IRNATPYDHK
PQYLIHDNNP VFVSKDFKTF LASSGIRSKR ISKRSPWQNG IAERSIGIIR QELLNYIIPF
NEKHLHRLLR EYIHEYYNTH RTHQGINGKT PIPLPTYLPT KASKTKLKAT PVLGGLYHTY
KKVA