| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2963 |
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| Symbol | |
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| ID | 4956426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3216632 |
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| End bp | 3218287 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640182151 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001114291 |
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| Protein GI | 134300795 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000191926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAACA AACAATTTTG GCATAGCCAT TACCCGGAAG GAATACCTAC CAGCTTAGAC
CTTCCCGGGG TTTCCTTATA TCATTTTTTG CAACGTTCCG CAGAAAAGTA CCCAGTAAAC
CCGGCGATCG TATTCTTAAA CCAGGAAATA ACCTATGTTG AACTGAAAGA AAGAGTTGAT
CGAATTGCCA CAGCACTCTA TGACTTGGGA ATAAAGAAAG GGAACCGAAT TGCTATCCTA
CTGCCCAACT GTCCCCAACT AGTTATCTCC TATTATGCTC TTTTAAGGAT AGGGGCGGTT
GGGGTGATGG TAAATCCCAT GTATACGGAG CGGGAATTGC TTTATCTGCT TAAGGACTCT
GGAGCAGAGA CCATTATCCT GCTGGAGCAA TTAAAGCCAA AGGTTATGAA GGTACTACCG
CAAACAGCCA TAACAACTGT TATTTCCACC GAGATACAGG AATATTTAGA CCTTGGCAAT
GATCTAAATC AGTTGTCTAA AACATGTCTC AGTACGGAAA AGGAGGCATA CTCTTTCGAA
CAACTTTTGG TTAAGTATTT GCCAGCTTTG CCGGAAATTA ATTTAAATGT AGAGAAGGAT
ATCGCCCTGC TCCAGTATAC CGGGGGTACC ACAGGAATTG TAAAAGGGGC CATGCTTACC
CATGGAAATC TCTCCAGCAA TGTCGTACAA ACCAGATACT GGTTAGACAG CTGTCGGGAA
GGAATGGAAA GGTTCTTTTG TGTGCTTCCT TTCTTTCATG TGTTTGCCAT GACCACCTGT
ATGAACCTGT CTGTTTACTT GGCATCGACC ATGATTTTAA TTCCTCGGCT AGAGGCTATG
AATTTACTTA AACAAATTGA ATTTTATCGT CCCACGGTTT TTCAGGGAGT ACCTTCCCTT
TATGTGGCTG TTATCGCCAA CCCCGATGTG AGAAAATATG ATCTTTCATC TGTACGTGTA
TGTCTGTCCG GTGGGGCTCC GCTGCCGGCG GAGGTGCAAC AAAAGTTTGA AGCTGTTACA
GGAGCGAAAC TGGTAGAAGG TTATGGTTTA ACAGAAGCGT CGCCGGTTAC TCATTGCAAT
CCCGTTAACG AAAAAATTGA TGGTTCCATT GGTTTACCCA TCCCCAACAC CGAATTTAAG
ATTGTGGACC TAGAAACTGG AACAAGGGAA TTGCTGCCGG GTGAAATCGG GGAGTTATGC
ATCCGTGGAC CCCAGGTAAT GAAGGGCTAC TGGAATATGC CGGAGGAAAC TGAAAAAGTT
CTCCGGGAGG GTTGGCTATA TACTGGGGAT ATTGCTTGGA TGGATGAGAA AGGCTTCACC
TATATTGTGG ATCGTAAGAA AGATATGGTT ATCAGTATGG GCTATAATAT CTATCCCCGA
GAAGTGGAAG AAGTGCTTTA TGAGCATCCC AAAGTAAAAG AGGCCGCGGT CATAGGTATA
AGGGACCGCA GCAGGGGTGA AGTTTTAAAG GCTTTTGTTG TTATTAAAGA GGGCGAACAA
GCCAAAAAAG ATGAAATTAT TAAGTTTTGT CGGCAGCAAC TGACCCAGTA TAAAGTGCCG
AAGAAGGTTG AATTTCGAAC TGAATTACCT AAATCAATGG TTGGCAAAAT CCTTCGCCGG
GTTTTAATTG AAGAGGAAAC GAATAGGGAA AAATAG
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| Protein sequence | MTNKQFWHSH YPEGIPTSLD LPGVSLYHFL QRSAEKYPVN PAIVFLNQEI TYVELKERVD
RIATALYDLG IKKGNRIAIL LPNCPQLVIS YYALLRIGAV GVMVNPMYTE RELLYLLKDS
GAETIILLEQ LKPKVMKVLP QTAITTVIST EIQEYLDLGN DLNQLSKTCL STEKEAYSFE
QLLVKYLPAL PEINLNVEKD IALLQYTGGT TGIVKGAMLT HGNLSSNVVQ TRYWLDSCRE
GMERFFCVLP FFHVFAMTTC MNLSVYLAST MILIPRLEAM NLLKQIEFYR PTVFQGVPSL
YVAVIANPDV RKYDLSSVRV CLSGGAPLPA EVQQKFEAVT GAKLVEGYGL TEASPVTHCN
PVNEKIDGSI GLPIPNTEFK IVDLETGTRE LLPGEIGELC IRGPQVMKGY WNMPEETEKV
LREGWLYTGD IAWMDEKGFT YIVDRKKDMV ISMGYNIYPR EVEEVLYEHP KVKEAAVIGI
RDRSRGEVLK AFVVIKEGEQ AKKDEIIKFC RQQLTQYKVP KKVEFRTELP KSMVGKILRR
VLIEEETNRE K
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