| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2953 |
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| Symbol | |
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| ID | 4956377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3203979 |
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| End bp | 3207095 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640182141 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001114281 |
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| Protein GI | 134300785 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.133437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAA CCAACCTCAG TTTAAAAAGG CCGGTTTTTG CAACTGTTAC CATTCTGGCT
CTGCTGGCCG TAGGCATGAT TAGTTACATA GGTTTAAATA TCAATGATAA CCCTGAAGTT
GAGTTTCCCT ATGTGGCTGT AACGGTTGTA CAACCCGGGG TTTCACCGGA GCAAATTGAA
AGCAAGATTA TTTATAAGTT AGAGGAAGCC ATTGGTCAGA TAGCCGGTGT TAAACATATT
TATGCCAATG CCCGGGAAGG GTATGCGCTT GTTTTTGCAG AGTTTACCCT TGAAACACCG
CCAGAGGTGG CAGCCCAGGA TGTTCGGGAT AAAATAGGGA CTATCCGGGG GGATTTGCCT
CAGGATATTG AGGAACCGAT TATTGCCAGG TTTGATCCTA TGGCCTATCC CATTATATCT
CTGGCGGTTA CCGGGGATAT CTCCATGCGA GAGATGACTG CGCTGGTTGA AGACCTAATC
AAAAGAAGAA TCGAAGTGGT TAAAGGCGTT GGTTCCATTG AACTCTATGG AGATGTAAAA
AGAGAAATCC ACATCAATTT AGATAAAGAT AAACTGGCGG CCTATGGGCT GTCAACCGCT
GAAGTGGTGA ATAACCTGCG CAGTGAGAAC ATGGAGATGC CCGGAGGTAA GGTGAGCAGT
CAAGACCGGG AGATTACCCT TCGTACCATG GGCAATGTAA ACAAGGTTGA GGAATTTGCC
AATTTGCCTG TGGCAAGGCG AGACGGGGTA CAACTCTATG TCAAGGATGT TGCCACAGTG
GTGGACGGTG TTGAAGAGCA AGACAGTATT GCCCATTATC AGGGTAAACA GGCCATCGGT
CTGGATATTT TAAAACAGTC CGGGGCCAAT ACCGTAGAAG TGGCGGACAA ACTGAAGGTA
GTTGTGGAAG AAGTGAAAAA GGAACTGCCG CCCGGCGTTA AACTTGAAAT CGTACGGGAT
AACTCGGCTT ATATCCGGGA TGCAGTAAAT GATGTTAGAA ACACTCTCAT GGAGGGCAGT
TTACTGGCGG TGCTGACTGT GTTTATTTTC TTGCGGGACT GGCGCAGTAC ATTGATAGCC
GCCCTGGCCA TTCCTTCTTC TATTATCGCC ACCTTTTTTG CCATGAAGCT TTTGGGCTTT
ACACTGAATT TTATGTCTTT AATGGCCCTG TCCCTGTCCG TTGGTCTGCT GATTGATGAT
GCCATTGTGG TCATTGAGAA TATTGTACGT CACTTGAGAA TGGGAAAACC CGCCCTGGAA
GCAGCCCGGG ACGGCACCAC GGAATTGGGA TTGGCGGTGA CATCCACCAC CTTAACAGTT
GTGGCAGTCT TTCTTCCCGT AGGGATGATG ACGGGCATTG TGGGTCAATT CTTCAAGCAA
TTTGGTCTCA CGGTTGTTTT TAGTGTATTG GTATCCCTTT TTGTGGCCTT CACGTTGGTA
CCCATGCTTT CATCAAGGTA TCTAAGGACC GAGGAATATG TTCTTAAAGG GTTCTTTGGC
AGGTTTATCA ATTGGTTTAA CAGGGGCTTT GACAGAGTTA CCCTTCGCTA TGCTGATTTT
CTTAAGGTGG TGCTACGAAA TCGTAAGAAA ACCATTGGTA TTGCAGTTTT ACTCTTTGTG
GGCAGCTTAA TGATTATTCC TTTGTTAGGC TCTACCTTTA TACCTGCCAG CGATGTGGGA
GAACTGTATC TGGTGGCGGA TATGGATGCT GGTTTAAGTA CAGAAGCTGC CGGTGCCATC
ACCCAAAAAA TCGAAGAAAA GCTTCGGCAA TATTCTGAAG TGACCAAGGT ATATTCCACC
ATAGAGGCGG ACAGTGCCAA CATTTTTGTC AAATTGGTGG ATAAACATGA CCGGGATCAA
ACCATTAATG AATTGGCGGC AACTATGAGA AGGCAATTGA ATACCATCCC TGGAGTTAAG
GTAACCATTA ATCAGCAGGG AGGTACGGGC CAGGGGGCCA TGGTTCAATT CAGATTACAG
GGAGAGAATT TGGATCAACT GCAAATCTAT GCGGAACAGG CAATGAGAAT CATGGAGAAT
ATTCCGGGCT CGGTGGATGT TGCCAGCAGT TATAAACCAG GCAAACCCGA AGGGCAAATT
TTTATCAAGC AGGATGTGGC TGCTGATTTG GGGGTAAGCA CAGCGAAGGT GGGGGATACC
CTGCGAACTC TCTTCAACGG AGTGGTTGTT AGCCAGTTTG AAGATGGCGA AGACCGTCTC
GATGTAAGGG TGCGCTTGTC AGAACATCAA CGAAGGAATC TGGCGGATCT GAATAACCTT
TACCTGCCCA GTGTTCATTC ACCGGAGGGC GAGCAGTTGA TGGTGCCCTT GAGTCAGTTG
ACAGAAACAG TCTTTTCTAC TGCTCCCAGT CAAATTAATC GCTTTGATCG GATTAAGGAG
ATAACCCTGA CTTGCAACTT GGATGGAGTT TCCCTGGGTG AATTTAACCA GGCCTTTAAG
GAGCGAGTGA ATCAAGAAAT TAAGTTACCA CCGGGTTATC GCTTCTATGA GGGTGGCGAC
GCAGAAATGA TGGGAGATAC CTTTGTTGCC ATGATTTTAG CTTTGATTAC TGCGGTGTTG
TTTATCTTCT TTATTCTGGC AGCCCAGTTT GAAAGTTATA TTGACCCCTT TTCCATTATG
CTATCTTTGC CCATGGCCAT TGTAGGTGCT ATTTTAGGGC TGTTAATTGT AGGCAGCGAT
CTAAGTCTTA TGTCCATGAT CGGTATCATC ATGCTAATGG GTCTGGTAAC TAAAAATGCT
ATTTTGTTGA TTGACTTTAC CAAGCAGCAG CGGGCCAGGG GTGTGGAGCG CAATGAAGCT
TTGCGTATTG CTGCCTTAAC CCGTTTGCGT CCCATTATAA TGACTTCCAC TGCTATGATT
CTTGGCATGA TGCCACTGGC ACTGGCCCTG GGACCCGGGG CTGAAGGACG GGCACCCATG
GCACATGCAA TAATAGGTGG TTTAATTACT TCCACTCTCT TGACGCTGGT GGTGGTGCCT
GTAATTTATA GTATTTTGGA TGATTTTAAG AAGAAGGGTC ATCAAGTTAA GGAACGGATT
TTTGCCCGGT CCAGACATAC TGAGACACCC AGTGTGAGTA AAGAAACAGT GCAATAG
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| Protein sequence | MFLTNLSLKR PVFATVTILA LLAVGMISYI GLNINDNPEV EFPYVAVTVV QPGVSPEQIE
SKIIYKLEEA IGQIAGVKHI YANAREGYAL VFAEFTLETP PEVAAQDVRD KIGTIRGDLP
QDIEEPIIAR FDPMAYPIIS LAVTGDISMR EMTALVEDLI KRRIEVVKGV GSIELYGDVK
REIHINLDKD KLAAYGLSTA EVVNNLRSEN MEMPGGKVSS QDREITLRTM GNVNKVEEFA
NLPVARRDGV QLYVKDVATV VDGVEEQDSI AHYQGKQAIG LDILKQSGAN TVEVADKLKV
VVEEVKKELP PGVKLEIVRD NSAYIRDAVN DVRNTLMEGS LLAVLTVFIF LRDWRSTLIA
ALAIPSSIIA TFFAMKLLGF TLNFMSLMAL SLSVGLLIDD AIVVIENIVR HLRMGKPALE
AARDGTTELG LAVTSTTLTV VAVFLPVGMM TGIVGQFFKQ FGLTVVFSVL VSLFVAFTLV
PMLSSRYLRT EEYVLKGFFG RFINWFNRGF DRVTLRYADF LKVVLRNRKK TIGIAVLLFV
GSLMIIPLLG STFIPASDVG ELYLVADMDA GLSTEAAGAI TQKIEEKLRQ YSEVTKVYST
IEADSANIFV KLVDKHDRDQ TINELAATMR RQLNTIPGVK VTINQQGGTG QGAMVQFRLQ
GENLDQLQIY AEQAMRIMEN IPGSVDVASS YKPGKPEGQI FIKQDVAADL GVSTAKVGDT
LRTLFNGVVV SQFEDGEDRL DVRVRLSEHQ RRNLADLNNL YLPSVHSPEG EQLMVPLSQL
TETVFSTAPS QINRFDRIKE ITLTCNLDGV SLGEFNQAFK ERVNQEIKLP PGYRFYEGGD
AEMMGDTFVA MILALITAVL FIFFILAAQF ESYIDPFSIM LSLPMAIVGA ILGLLIVGSD
LSLMSMIGII MLMGLVTKNA ILLIDFTKQQ RARGVERNEA LRIAALTRLR PIIMTSTAMI
LGMMPLALAL GPGAEGRAPM AHAIIGGLIT STLLTLVVVP VIYSILDDFK KKGHQVKERI
FARSRHTETP SVSKETVQ
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