| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2835 |
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| Symbol | |
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| ID | 4957381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3076683 |
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| End bp | 3078458 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640182016 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001114164 |
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| Protein GI | 134300668 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000281177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTG TTTTGGAGGA GAATTTAATG AAAGTTAAGC AGGTTATGTT AGAGAATCCT
CGGACGCTGC ATCGTAGTAA AACACTGCGA GATGCCAGTG AGGTCTATAA ACAAACTAAA
GTGAACTGTG CTCCCATTGT TGATGATGAA AACAATGTGG TGGGAATCTT AACCGTTTTT
CGGTTATTGG AGGCCTTAGA AAACGGAGCA ACCTTTGCAA CCCGTGTGGA TGTGGTTATG
GATCGTAACT TGCAGATTAT TGATGAAGAT ACCTGCTTTA GTGAAATCTG TCATAAACCC
ATCGATCGAC TTGTAATCTT TAATCAAAAG CAGAAACTAA CAGGGGTCTT AACAAGAATT
GATCTCATCA ATAAAGTTCA TAGGGCCTTG GAAAATACCG AGGATAAATT GGCTGAAGCC
TTTGAAACCA ATCAAAGGCT TAGAAGCATC ATTGAGGCTT CCTATGATGG GATCATTGTG
GTGGATAGCC AAGGAGTTGT TCAAATGGTC AACAGCAGTT ATTTTAGACT GCAGGATTCC
TCCCATGACC CTGCAGGAAC TTCCTTGGAA CAGATACCCC TTGACTGTCA CGACGACGTG
ATAAAAGTGT TTCAAGAGGT TATGCAACAG GGAAAAGTGG CCTTTGCCCG TTATCAGGGA
GAGAATCTCA GTGAGTTGAC CATTACTGGT TCACCTATTT TAGATGATCA AAACAGCCCG
GTTCATGTGG TGATCAGCCT ACATGACTTC ACAGAGTTAA ACCAATTAAG GCTGCAATCA
GCTCGGTATT CCGAGGAATT AAAATCCTTA CGGACTAAGA ACCAAAAGGA TTTGATCTTT
CACGACACTG CCATGGAACG GGTTGTAAAA AAGGCCCTAC GGGTATCTGA GGTGGATTCA
ACCGTGTTGA TTACAGGTGA ATCCGGAGTG GGAAAAGAAG TGATTGCCAG GACCATTCAT
CGCAACAGCC CCAGGGCAGA GGGGCCTTTT ATTGAAATAA ATTGTGGCGC TATTCCTGAA
CACCTTTTAG AATCGGAACT ATTTGGTTAT GAAAAGGGAG CCTTTACCGG AGCCAATAAA
GAAGGAAAAC CCGGTATGAT GGAATTGGCC AACGGGGGTA CACTGCTGCT GGATGAGGTA
GGGGACTTGC CTTTGAACCT CCAGGTTAAG TTGCTGAGAG CCCTTCAAGA GCAGGAAATT
TACCGCATTG GAGGACGAAC TGCTGTTAAA TTAAATGTAC GTATTCTTGC TGCCACTAAT
AAAAATTTAG AGCAAATGAT TGCAGAAAAG AAATTTAGGG AAGATTTGTT TTACCGTTTG
AATGTTGTAC CCATTCATAT TCCACCCCTA CGAGAACGAA AAAGTGATAT TTTGCCTCTA
AGCATGCATT TTTTAGAAAA ATTTAACAAT AAATATAACT TTCACAGACT TTTTTCTTCC
GAAGTATTCA AACTTTTTGA GCAGTACCCT TGGCCCGGCA ACATCAGAGA ACTGGCTAAT
TTGGTGGAAC GGTTGATAAT TATGTCAGAA CAGGAAACCA TTTACCCAGA TCAATTGCCT
CCAACATTTT TTGGCAAACC ATCAACCAGT CCTCTGCAAA TATCCATTGA TGAGATCATT
CCTTTAAAGG AGGCCAGAGA ACAGGTTGAA AGCGAGCTAA TCGTAAAGGC CTTGAAACAA
TATAGAAGTT TGAGGCGTGC TGGAGATGCG CTGGGTGTAG CCCATTCTAC TTTATTACGT
AAAGCTAGGG CTCTGGGTAT CTCCGTTGAG GAATAG
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| Protein sequence | MSFVLEENLM KVKQVMLENP RTLHRSKTLR DASEVYKQTK VNCAPIVDDE NNVVGILTVF
RLLEALENGA TFATRVDVVM DRNLQIIDED TCFSEICHKP IDRLVIFNQK QKLTGVLTRI
DLINKVHRAL ENTEDKLAEA FETNQRLRSI IEASYDGIIV VDSQGVVQMV NSSYFRLQDS
SHDPAGTSLE QIPLDCHDDV IKVFQEVMQQ GKVAFARYQG ENLSELTITG SPILDDQNSP
VHVVISLHDF TELNQLRLQS ARYSEELKSL RTKNQKDLIF HDTAMERVVK KALRVSEVDS
TVLITGESGV GKEVIARTIH RNSPRAEGPF IEINCGAIPE HLLESELFGY EKGAFTGANK
EGKPGMMELA NGGTLLLDEV GDLPLNLQVK LLRALQEQEI YRIGGRTAVK LNVRILAATN
KNLEQMIAEK KFREDLFYRL NVVPIHIPPL RERKSDILPL SMHFLEKFNN KYNFHRLFSS
EVFKLFEQYP WPGNIRELAN LVERLIIMSE QETIYPDQLP PTFFGKPSTS PLQISIDEII
PLKEAREQVE SELIVKALKQ YRSLRRAGDA LGVAHSTLLR KARALGISVE E
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