Gene Dred_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2829 
Symbol 
ID4956623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3069754 
End bp3071037 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content44% 
IMG OID640182010 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_001114158 
Protein GI134300662 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA AACAAAAACA AAGAATTGAG CAACTCACTG AATCAACTTT AATTATTGGA 
GCCGATATTG CCAAATCTAA ACACGTGGCA CGTGCCCAGG ATTTTAGGGG TATCGAGTTG
GGGAAACGCT TGGTCTTTGA CAACACTAGG GCGGGCTTAA CCAAGCTGAT GCATTGGATT
AGAACCTTGA TGGTAGAGCA CGGTAAGGAT CATGCTCTGG TAGGTATCGA ACCCACAGGA
CACTACTGGT TACCAATGGC TGAGTTTTTG CGCAAAGAAG GTGTACCAGT TGTAGTTGTA
AATCCGTTGC ATGTTAAGAG AAGCAAGGAA TTAGATGATA ACTCGCCCAC AAAGAACGAC
ATCAAAGATG CAAGGGTAAT TGCCCAATTA GTAAAAGATG GCCGTTACTC AGAACCCAAC
TTACCCACAG GTGTCTATGC GGAACTGCGG GTGGGAATGG TTCAAAGGGA CCGTCTTAAT
CAAGACCTTA ACCGAGTAAA AGGTAGAATC CACAACTGGC TTGACCGGTA CTTCCCCGAG
TACACAAGTG TTTTCAAAGA TTGGGAAGGC AAAGCATCCT TGATGATATT AAATACTTGT
CCACTCCCCC GGGAAGTCAT CAAAACAGGC ACAGAGGCAA TTGTAACCCT GTGGAAAACT
GAGATTAAAC GGGCAGTTGG TATAAAAAGA GCTAACAAAC TAATGCAGGT TGCTAGAGAA
TCCATCGGAC TATCCACAGG GATAGAGTTT GCCCGTCATG AAATAAGGAT GCTACTTGAA
CAATATGACA TCCTGTGCAA ACAGATGGAA ATCCTGATGG AAGCAGTTCA AGAGTTACTG
CAACAAATAC CTGGAAGCAC AGAAATGATG ACCATTCCAG GAGTCGGTTT GGTTACAGTA
GCCGGATTTC TTGCAGAAGT AGGCGACTTA AAAGGATATG AACATGGGCA ACAAATCATA
AAGTTGGCGG GCCTAAACCT AAAAGAGAAC AGTTCTGGTA AACACAAGGG ACAATCACGA
ATCAGTAAAC GGGGGCGCCC CCGGCTGCGG GCCTTGTTAT TTAAGACTGT GTTAGTCATG
GTTGCAAAAA ACCGAGAGTT TAAGGCCATC CACCAATATT TAATAACAAG GCATGGAAAT
CCCTTAAAGA AAAAGCAATC CATAGTTGCC CTCTGTGGAA AATTGATTCG TATTTTGTTC
ACCATAGGCA GTAAACAAAC TCCATATGAC GCGGAGCAAG TATTAGGCGT TGTACGCCAA
GAGCAATTAC AGGAAGCTGC TTAA
 
Protein sequence
MNYKQKQRIE QLTESTLIIG ADIAKSKHVA RAQDFRGIEL GKRLVFDNTR AGLTKLMHWI 
RTLMVEHGKD HALVGIEPTG HYWLPMAEFL RKEGVPVVVV NPLHVKRSKE LDDNSPTKND
IKDARVIAQL VKDGRYSEPN LPTGVYAELR VGMVQRDRLN QDLNRVKGRI HNWLDRYFPE
YTSVFKDWEG KASLMILNTC PLPREVIKTG TEAIVTLWKT EIKRAVGIKR ANKLMQVARE
SIGLSTGIEF ARHEIRMLLE QYDILCKQME ILMEAVQELL QQIPGSTEMM TIPGVGLVTV
AGFLAEVGDL KGYEHGQQII KLAGLNLKEN SSGKHKGQSR ISKRGRPRLR ALLFKTVLVM
VAKNREFKAI HQYLITRHGN PLKKKQSIVA LCGKLIRILF TIGSKQTPYD AEQVLGVVRQ
EQLQEAA