Gene Dred_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2768 
Symbol 
ID4956283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3000879 
End bp3002411 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content42% 
IMG OID640181948 
ProductABC transporter related 
Protein accessionYP_001114097 
Protein GI134300601 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAATCAT ACGCGGTGGA AATGAAGGGG ATCACCAAAG GATTTAAGGG AGTTATTGCC 
AATAACCAGG TGAATTTTCG CTTGGCCAAG GGATCTATCC ACGGACTACT TGGCGAAAAC
GGAGCCGGTA AAACAACTCT CATGAATATT TTATTTGGTC TTTATCAACC AGAGGCAGGC
CAAATTTTTA TTAATGGCAC AGAGGTGGTC ATAAACAATC CTACCCAGGC CATGAATTTA
GGCATAGGCA TGGTACACCA GCATTTTATG TTGGTAAGAC CCATGACTGT GGTGGAAAAC
ATTATGCTGG GGTTACCGGC TAAAAGGGGA ATTTTTTTAG ACAAAGGGGC TGTGGAGGAC
TCTCTTAAAA AACTATCAGA AAAATATAAC CTGAAGGTGA ACCCCAAAGC CCAGATTAGA
CAGCTCTCTG TTGGGGAACA ACAGAGGGTG GAAATATTAT CAGTTCTTTA TCGGGGTGCC
GATATTTTAA TCCTGGACGA GCCCACCGCT GTATTAACAC CCCAGGAAAC AGCGGAGCTG
TTTAAAATTC TTAAGCTCAT GCGTGACGAC GGAAAATCCA TTATTCTTAT TACTCATAAA
TTAGAAGAAA TATTAGAGAT TGCCGATGAA GTAACCGTAT TAAGGGATGG TTGCCAAGTT
GGAGGAGAAA AAATAACTAA CCAAACCACC AAAAGTGATT TAACCAATAT GATGGTGGGG
CGGGAAGTGT TGTTAAGCTT TGACGAAAGG CCTGACTGCA CAGGGGAAAC AAGGCTGGTT
GTTGATAATG TTACCCTAAA GAATGAAAAT AAGTTACTGG TATTAGACTG TGTTAATTTT
AATATCCGAG CCGGAGAAAT ATTAGGGTTG GCTGGTGTGG ACGGAAATGG TCAAAAGGAA
TTATGTGAAG TACTTACCGG ATTACGACCT TTAACTTCAG GAAAAATTCA ATTGGATGGG
CAGGTCCTGA GTGGTAAAAA TCCCAGTGAA TATATTAAGG AAGGAATTGC TCATATTCCG
GAAGATCGTC ATAAAACCGG TTTAGCAATG GGCTTTGATA TAACTAACAA CTTAATTATC
AAAGAATATC AGAGTCCACG TTTTTCCACC GGGGGCTTGT TAAATTTTAA AGCCATTGCT
GCCAATGCCC AACAATTATT AAATGAGTAT CGCATTAAGG CCAGTGGACC AGAGGCAAAG
GCAAAGGACC TCTCAGGCGG TAATCAACAG AAAATTATTC TGGCCAGGGA AATTAGTTCG
TCCCCCCGGG TTATTATTGC CAACCAACCA ACCAGAGGGC TGGATATTGG TGCCTCCATG
TATGTCCGGG AAAAACTTTT GGAACAAAGA GAAAAAGGGG TTAGTATCCT ATTAATTTCC
GCAGACTTGG AAGAACTTCT CCAAATATCT GACCGCATAG CTGTTATTTA TGAGGGCCGG
ATTAAAGGAA TTCTTAAAAA CAAAAATGTT AGTATCGAGG AAATTGGTAT GCTGATGGCC
GGTGTAGAAA GCGGGGAAAA GACGGCATGT TGA
 
Protein sequence
MQSYAVEMKG ITKGFKGVIA NNQVNFRLAK GSIHGLLGEN GAGKTTLMNI LFGLYQPEAG 
QIFINGTEVV INNPTQAMNL GIGMVHQHFM LVRPMTVVEN IMLGLPAKRG IFLDKGAVED
SLKKLSEKYN LKVNPKAQIR QLSVGEQQRV EILSVLYRGA DILILDEPTA VLTPQETAEL
FKILKLMRDD GKSIILITHK LEEILEIADE VTVLRDGCQV GGEKITNQTT KSDLTNMMVG
REVLLSFDER PDCTGETRLV VDNVTLKNEN KLLVLDCVNF NIRAGEILGL AGVDGNGQKE
LCEVLTGLRP LTSGKIQLDG QVLSGKNPSE YIKEGIAHIP EDRHKTGLAM GFDITNNLII
KEYQSPRFST GGLLNFKAIA ANAQQLLNEY RIKASGPEAK AKDLSGGNQQ KIILAREISS
SPRVIIANQP TRGLDIGASM YVREKLLEQR EKGVSILLIS ADLEELLQIS DRIAVIYEGR
IKGILKNKNV SIEEIGMLMA GVESGEKTAC