| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2556 |
|---|
| Symbol | |
|---|
| ID | 4957984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2781503 |
|---|
| End bp | 2782600 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181735 |
|---|
| Product | ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component |
|---|
| Protein accession | YP_001113891 |
|---|
| Protein GI | 134300395 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAATAC GCTGGAGGTT ATGGTTATTC ATTTTGTTGC TACTCTTTGC TATAGTCGGT
TTAGGTACAT TTGGTGTAAA AAACTTTCTG TTTTACAGCC AGGAGACAGA AAAACCTGAT
CGGATAAAGG TGGTAGAGGG ACAACTTACA TTCCTGGCTC TACCCCATTA CATTGCATTG
ACCCAGGGTT TTTACCGGGA ACAAAACTTA GAAGTAGAAA CTGCTGTTAC AAACACTCCC
CCAGAGGAAC AGCTGAACTT AAAGGGACAG GGTGATGTAT TCCTGGGCAA TCTTTGTCAA
ACTGTTTTTA CCCGCCCACT GGGAACTGGG GCAGATCTCG TAGCCTTCGG GGCATTAGCC
CAAAAAGAAG GGGCCTTTCT ATTATCCCGA AAGGATGACC AGAAGTTTTC CTGGGAGAAT
GTTAAAAAGA AAATCATTTT AGGAGATGCA CCAGATACAC AGTCTAATAT TATTTTAGAA
GAAGCTCTAA GACAAAATAA TTTAGCATTA CAGCATCATG TTATTATTGT GCAAAACCTG
CCATCTAATC TAAAAGAGGG TGCCTTTCAG GCCGGTGTGG CCCATTATCT ACAAATGCCC
CAGCCCTTTG CCTATCAAAT TCAAGAGAAC CAACTTGGAA AAATTGCTAT TTTTTTAGGA
GATGCTGTTG CTCCCATCCC TTCGTTGGTT ATTCTGGCAC CGGAATCATA CCTGAAGCAA
CACAGCAAGG AGTGTCAAAA GCTTGTTAAT GGGCTTTGCA AGGGACTTTT ATGGCTGGAC
TATCACAAAC CAGAGGAAGC AACCAGAGTA GTGGCTTCTT ACTTCCCGGA GTTGGATAAA
AAAACCCTTA CAGCAATTAT TAAACAGTAC AAAGAATTAG GTATGTGGGG TAAAAACCCG
TTGATTGCAG AGGAACATTA TGAACATCTA AAGGCCTATG TAAGCCGTGC CGGCGAACTA
ACCAACCCTG TGAAATTCAG TGATGGAGTC AATAACAAGC TGGCCAAAAA GGCTGCCAAG
ACAGTAAAAT ATATTCCCCC GGAACAGCAG AAAGAAAAGA CCTGGTGGGA AAAGGTAAAG
AGCCTGGATT TTAAGTGA
|
|---|
| Protein sequence | MRIRWRLWLF ILLLLFAIVG LGTFGVKNFL FYSQETEKPD RIKVVEGQLT FLALPHYIAL
TQGFYREQNL EVETAVTNTP PEEQLNLKGQ GDVFLGNLCQ TVFTRPLGTG ADLVAFGALA
QKEGAFLLSR KDDQKFSWEN VKKKIILGDA PDTQSNIILE EALRQNNLAL QHHVIIVQNL
PSNLKEGAFQ AGVAHYLQMP QPFAYQIQEN QLGKIAIFLG DAVAPIPSLV ILAPESYLKQ
HSKECQKLVN GLCKGLLWLD YHKPEEATRV VASYFPELDK KTLTAIIKQY KELGMWGKNP
LIAEEHYEHL KAYVSRAGEL TNPVKFSDGV NNKLAKKAAK TVKYIPPEQQ KEKTWWEKVK
SLDFK
|
|---|
| |