Gene Dred_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2533 
Symbol 
ID4955765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2757096 
End bp2757653 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content39% 
IMG OID640181712 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001113868 
Protein GI134300372 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0982536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATATTA AAAACCTGCT GGAAGTTATT CAGGTACAAA GACATGATTT CTTAAATCAT 
TTACAGGTTA TTTCAGGCTT ACTTCAGTTG AATAAAGGGG AAAGGGTACG GGATTATATA 
AATCAGGTTT GTGTAGAATA CGAGAATTTA AGTAAAATTA CCCGGATCAA ATCCCCAGAA 
GTTAAGGCTG TTTTGCTGGT TGCCAGCAAC GAAGCAAGTA AATGCCAAAT TAATTTTCAA 
TTTGATATAA CGACTAATCT AGCATCGCTG GATGTTCCAG GAGAGGCGGT AGCTTCTGCT 
CTTAGCCGTT GCATAAAGCA TGCTTTAAAG TTTCTAACAC CACCGGAAGT AACTGATCGA 
AGGATGCGGT TAACGATCAG TGAGGGAGAA AAAAAGATTA CAATCAAACT TGGCTTTCCG 
GGAGTCCCTG CTGAAGTTGT GAAAGATGCC CAGGAGCAAA TGAGCCTTTC TGAAGCGTTG 
GCAGCTTACA ACAGCAACTC TAAAATGGCT GTAACAGAAA AAGAAGCAGA AATCTATATG 
ATATTTCCAA AGAAATAG
 
Protein sequence
MDIKNLLEVI QVQRHDFLNH LQVISGLLQL NKGERVRDYI NQVCVEYENL SKITRIKSPE 
VKAVLLVASN EASKCQINFQ FDITTNLASL DVPGEAVASA LSRCIKHALK FLTPPEVTDR 
RMRLTISEGE KKITIKLGFP GVPAEVVKDA QEQMSLSEAL AAYNSNSKMA VTEKEAEIYM 
IFPKK