Gene Dred_2461 details

Gene Information

• Locus tag: Dred_2461
• ID: 4956336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 2677420
• End bp: 2679300
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640181633
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001113796
• Protein GI: 134300300
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.670502
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGCAGA GTGTGAAGGC AAAATTATTG ATACCGCTGA TTATGATTTT TGGAGTTTCA 
TTAATCACCC TTGTTTCCTT AAATCATTAT CAAATGAGAA GTGCTATCCT AAGCCAGGAG 
CAGGTAAGTT TCCGGAATAT TGAAAGTATT GTTCGCAACG ACTTGGAGGC AACTTTTACT 
TCCACTCGCA TGGGGCTGAC CAGTGTTATT AATATGCCGG AAGTGCAGCA GGCCTTTGCA 
CGAAGGGACC GGGAAGAACT GCAACGACTT ACCGCACCCA TTTTTGAGCA AGCTAAAAAG 
GATGGTATTG AACAGTTTCA GTTTCACTTG CCCCCAGCTA CCTCTTTCCT GCGTCTGCAT 
CAACCACAAA AGTATGGGGA CGACCTGTCA TCTTTCCGAG CCACCGTGGT TCAAAGTAAT 
CAAGAAAAGA AACTGGTGGC TGGGTTAGAA GAGGGACGAG GTGGTTATGG TTTCCGGGTG 
GTGGCCCCTG TTTTTTTTCA GGGACAACAT GTAGGAAGTG CCGAATATGG CATGGGCTTT 
AGCCCTACAA TCTTAGAACG TTGGAAGGAA CAGTGCGGTG GAGATTTCTA TATGTATCCC 
TTTGCCAGTT CCGAAGTTGC TTGGCAAAGG GTTGACAAAA GCAAACCATT GGTGGGTACA 
GCAAAGGAAG ATCCTCTTAA AATAGATGAA AATGAGATAA AGAAAGCCAT GTCCAGCAAA 
GGTGTCTACG CCAGCTATGT AAACGGTGAT AACCATGCGA TTCTGATTAT TCCGGTTTAT 
GACTACAGTG GGAAACCCAT CAGCTATGTG AAGGCGAACC TGGACCGTAC CGAAGTCTTA 
AATAAATTGG ATACCGTGTT GCGGGACAGC ATAGTCCACC TACTTTTATC ACTCTTGATA 
ATTTCCCTAA TTATGTATTG GTTAATTACG ATCACATTAA AGCCACTGCA AAGAATCAGT 
GATAATATGA CTACCGTAGC CAGTGGAGAC TTAACCAAGA AATTGCAGTT GCAAGGTAAT 
GATGAGATCT CTAAACTGGG ACAAAGTTTT AATACCATGC TGAAGGATTT TCGGCGTTTA 
ATTGGAGAAA CACGTTATAT AACCGGGGAA CTCACTAAGT CCAGCAAGGC CCTCAGTATG 
GTAACGGAAG AAACCAGTGT TTCAGTGGAG GAAGCAACTG AACAGGTAGA AAAATTAGCC 
TATTCTTTGC AGGAATTGGA TACGATGGCC AAGCATGCAG CGGATTATTC CCAACAAGCA 
GCCGGAGCTG CAGAGGAAGG CCAGCAAGTA GTCCAACAAG CAGTTAAACA GATACAAATT 
TTGGATAGCA TGGTGGAAGG CTTGTCTCAG GAAACTGGTG GACTTGGACA AAAGATCGAA 
GATGTTAACA AGTTTGTACA GCTCATTAGC GAAATCGCAG AGCAAACAAA CCTGCTGGCA 
TTGAATGCCG CCATTGAGTC TGCCAGGGCA GGGGAGCATG GACGAGGTTT TTCTGTGGTA 
GCCCAGGAGG TTCGTAAGTT AGCCGACCGC TCCAATCAGG CAGCCAAAGA TGTAAAGAAT 
ATTATTATAG AAATAACAGA GCAATCCGAA AATGTCATGT TTAACATGAA TGAAGGGTTA 
AAGGAAGTCC ATGCAAGCCA CCAATTGATT AACGAATCGG GAGTAAAATT TAAACGGATT 
AAAGAGCTTG TAGAATTAAT GGCGCAACAA TCCCAAGCCG TGGCTGTTTC TGGTAGCCAG 
GCTACGGCCA GTAGTTCTGA AATATCAGCA GCCATTCAAG AACAAGCTGC TTCCATTCAA 
CAAGTAGCAA CCTCTGCAGG TGTCTTAGAC CAAATGGCAG AGGACCTAAA GCAACAACTG 
AGCCGGTTTA AAAGTAGCTA G 

 

Protein sequence

MQQSVKAKLL IPLIMIFGVS LITLVSLNHY QMRSAILSQE QVSFRNIESI VRNDLEATFT 
STRMGLTSVI NMPEVQQAFA RRDREELQRL TAPIFEQAKK DGIEQFQFHL PPATSFLRLH 
QPQKYGDDLS SFRATVVQSN QEKKLVAGLE EGRGGYGFRV VAPVFFQGQH VGSAEYGMGF 
SPTILERWKE QCGGDFYMYP FASSEVAWQR VDKSKPLVGT AKEDPLKIDE NEIKKAMSSK 
GVYASYVNGD NHAILIIPVY DYSGKPISYV KANLDRTEVL NKLDTVLRDS IVHLLLSLLI 
ISLIMYWLIT ITLKPLQRIS DNMTTVASGD LTKKLQLQGN DEISKLGQSF NTMLKDFRRL 
IGETRYITGE LTKSSKALSM VTEETSVSVE EATEQVEKLA YSLQELDTMA KHAADYSQQA 
AGAAEEGQQV VQQAVKQIQI LDSMVEGLSQ ETGGLGQKIE DVNKFVQLIS EIAEQTNLLA 
LNAAIESARA GEHGRGFSVV AQEVRKLADR SNQAAKDVKN IIIEITEQSE NVMFNMNEGL 
KEVHASHQLI NESGVKFKRI KELVELMAQQ SQAVAVSGSQ ATASSSEISA AIQEQAASIQ 
QVATSAGVLD QMAEDLKQQL SRFKSS