Gene Dred_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2451 
Symbol 
ID4955994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2665969 
End bp2666949 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content48% 
IMG OID640181623 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001113786 
Protein GI134300290 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.281657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGA CATTATTAGA AGTAAAGGAC CTCAAAACCC ACTTTTTCCT GGAGGATGGA 
GTGGTACCGG CCGTTGACGG TGTAAGTTTT TATTTAAACC GTGGCGAGAC CCTGGCTGTG 
GTGGGGGAAT CAGGCAGCGG TAAGAGTATT ACTGCCACAT CCATTATGCG ATTAATTCCT 
AATCCTCCCG GTCGTATCGT GGGAGGGGAA ATCCTTTATA ACGGGGAAGA TTTATTAAAG 
AAAAGTGAAA AGGAAATGAG AGATATCCGA GGCAATCGCA TCTCCATGAT CTTCCAGGAA 
CCCATGACCT CCCTGAACCC AGTTTTTCGG GTGGGTCAGC AAATTTCTGA GTCCTTAATT 
ATTCACCAAG GGTTAAACAA AAAGGAAGCC CTGGAAAAAA GTATCGAGAT GTTGAAACTA 
ACGGGTATTC CCTCACCGGA AAAAAGGGTG CACGATTTTC CCCACCAGAT GAGTGGAGGA 
ATGCGGCAAC GGGTAATGAT TGCCATGGCC CTATGTTGCC GACCGGAGCT ATTGATTGCC 
GATGAACCAA CCACAGCCCT GGATGTAACC ATTCAGGCAC AGATTTTGGA TTTAATGCAT 
GAATTAAAGG AACAATTGGG TACGGCCATT ATCATGATTA CCCACGACCT AGCTGTGGTG 
GCAGAAATGG CTGACCGTGC CGTAGTTATG TATTGTGGCA AGTTGGTGGA AGAGGCACCG 
GTGCTGGAAT TGTTTGATAA CCCGCTGCAT CCCTACACCA AGGGTCTGCT GAGATCCATT 
CCTCATATCA CCGACACCCA GGAAAGGCTT TATATGATTG ATGGTATGGT GCCTCCTTTA 
ACCAATTTGC CTGTGGGCTG TGCCTTTGCA CCCCGCTGCC CGGAGGCTCA ACCCCGTTGT 
CATGCGGAAC GTCCTACCCT AACCCAAGTT TCACAGGGAA GACGGGTCAG TTGTTGGCTA 
CATGAAGGAG GTGCTCGCTA A
 
Protein sequence
MTQTLLEVKD LKTHFFLEDG VVPAVDGVSF YLNRGETLAV VGESGSGKSI TATSIMRLIP 
NPPGRIVGGE ILYNGEDLLK KSEKEMRDIR GNRISMIFQE PMTSLNPVFR VGQQISESLI 
IHQGLNKKEA LEKSIEMLKL TGIPSPEKRV HDFPHQMSGG MRQRVMIAMA LCCRPELLIA 
DEPTTALDVT IQAQILDLMH ELKEQLGTAI IMITHDLAVV AEMADRAVVM YCGKLVEEAP 
VLELFDNPLH PYTKGLLRSI PHITDTQERL YMIDGMVPPL TNLPVGCAFA PRCPEAQPRC 
HAERPTLTQV SQGRRVSCWL HEGGAR