| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2338 |
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| Symbol | |
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| ID | 4957163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2555674 |
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| End bp | 2556930 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640181510 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_001113673 |
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| Protein GI | 134300177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00139] homoaconitase
[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCAAAA CTATTATTGA GAAGATATTA TCTTCTCATA GCGGCCAGGA TTGCCAGGCC
AATGACATCG TGGTAGCCCA GGTTGATTTT GTCATGGGAC AGGACGGTAC ATCACCGCTG
GCTATTCGGG CCTATGAAAA TATGGACGGC AAGGAACTAT TTGATCCAGA AAAGGTTGCC
TTGGTTATTG ACCATAGTTC TCCCAGCCCC CTAGAAGGGG TATCTGCTTT ACATAAAATT
ATGCGTCAGT TTGCTAAGCA AAAGGGTTGT CACCTTTATG ACATTGGGGA AGGGGTTTGT
CACCAACTGA TTCCCGAAAG TGGTAAGGTT GGTCCGGGTA GTCTGGTCAT TGGTGCAGAC
AGTCATACCT GTACCTACGG GGCATTGAAT GCTTTTTCCA CCGGGGTTGG CTCCACGGAC
CTAGCCGGAG GACTGATTTC CGGCAAAATG TGGTTCAAGG TACCGGAAAC CATTAAATTT
GTCTGCAATG GTGTACTGCC CAGCGGAGTT TATGCCAAGG ATTTAATTCT CTACTTAATT
GGTCAGGTAA CTGCCGATGG TTGTACCTAT ATGGCAGCGG AATACACCGG TGAGGCCATT
GCTGCGTTGT CCATGGAAGG CCGCTTCACC ATATCCAACA TGGCCATTGA AATGGGGGCC
AAGGCTGGTT TAATGGAAGC CGATGATAAA ACCTTTGCAT GGCTGAAACA ATACACAGAA
CGGCAATTCA CAGCGGTTTC TGCCGATGCT AATGCCAATT ACTATAAGGT ACTGGAACTT
GATGTTTCCA ATCTGGAGCC CCAAGTGGCT AAACCCCACC GGGTGGATAA CGTATCTCCC
CTATCAGAGG TAAAAGGACT TCCTATTCAA CAGGCCTTTT TAGGAACCTG TACTAACGGT
CGTCTGGAGG ATCTGCGGAT TGCTGCTTCA ATCCTAGCTG GTAAAAAGGT TCATCCAGAT
GTACGGTTTA TTGTAGCACC TGCATCCCGT AAGATATATC TGGAAGCTAT GGAAGAAGGA
GTCATTCAGC GGTTGGTGGA AGCCGGTGCT GCGGTTGTTA CACCCGGTTG CGGTCCCTGT
GTGGGTACTC ACAATGGTGT TCCTTCAGAC GGTGAAACCG TCATTTCCAC GGCAAACCGT
AATTTCAAGG GGCGCATGGG CAACAGCAAT GCAGAAATTT ACCTGGCTTC TCCGGCAACG
GTGGCAGCCT CAGCATTGAC AGGTGTCATT AGCGACCCCA GAGACTTCGT AAAGTAG
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| Protein sequence | MGKTIIEKIL SSHSGQDCQA NDIVVAQVDF VMGQDGTSPL AIRAYENMDG KELFDPEKVA
LVIDHSSPSP LEGVSALHKI MRQFAKQKGC HLYDIGEGVC HQLIPESGKV GPGSLVIGAD
SHTCTYGALN AFSTGVGSTD LAGGLISGKM WFKVPETIKF VCNGVLPSGV YAKDLILYLI
GQVTADGCTY MAAEYTGEAI AALSMEGRFT ISNMAIEMGA KAGLMEADDK TFAWLKQYTE
RQFTAVSADA NANYYKVLEL DVSNLEPQVA KPHRVDNVSP LSEVKGLPIQ QAFLGTCTNG
RLEDLRIAAS ILAGKKVHPD VRFIVAPASR KIYLEAMEEG VIQRLVEAGA AVVTPGCGPC
VGTHNGVPSD GETVISTANR NFKGRMGNSN AEIYLASPAT VAASALTGVI SDPRDFVK
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