| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2319 |
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| Symbol | dnaE |
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| ID | 4958313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2535584 |
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| End bp | 2539261 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640181491 |
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| Product | DNA polymerase III DnaE |
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| Protein accession | YP_001113654 |
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| Protein GI | 134300158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.511943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGAGG GGAAAGTAGT GCCGGAGAAT CAATTTGTCC ACTTACACGT ACATACTGAA
TACAGCCTGC TGGATGGAGC AAGCCGTATT AATCAAATGG CTAAGCAGGC CAAAGAAAGT
GGCATGAATT CCCTTGCCAT TACCGATCAC GGCTGCATGT TTGGGGTGGT AGACTTTTAC
AAAGTCTGCC ATAAGGAAGG GGTAAAACCC ATACTAGGCT GCGAAGTCTA TGTGGCACCC
CGCCGCAGGA TTGACCGGAC ACCCAAACTG GACGATCAAC CGAATCATCT GGTACTGCTG
GCTGAAAACC AGGAAGGGTA CAAAAACCTT CTAAAATTGG TGTCCCTTGG TTATACCGAG
GGTTTTTATT ATAAGCCCAG GGTGGATAAG GAACTGCTAC AGCGCTATCA CAAAGGACTT
ATTGCCCTCA GTGCCTGTTT GGCAGGGGAG GTTGCCGATA AAATCTTAGG CAGCCAACCG
GAAAAGGCTC GCCAGGCCGC AAGAGAGTAT GTTGATATTT TTGGTAAAGA CAACTTTTTT
TTAGAACTGC AGGACCACGG TTATCAAGAA CAGCGTACAG TTAACCGGGA ATTACTAAAA
ATTGCCAAAG AATTACAAAT CCCGCTGGTG GCAACCAACG ATGTTCATTA CCTGAAACGG
GAACATGCAG AGATACAGGA TGTGTTGCTT TGTATTCAAA CCGGTAAAAG CATTAACACA
CCGGGAAGAA TGAAATTCGA AAGCCAGGAA ATGTACTTGA AAAGCCCCCA TGAGATGAAC
CTTCTCTTTG CTGAGATACC CGATGCCCTG AGCAACACAC TGCGTATTGC CGAGCGGTGT
CAGGTGGATT TAGAATTTGG CAAGTACCAC TTACCTTATT TTACAGTACC CGAAGAATCC
AGCCCAGCCC AATATCTACG GGAAAAATGC CTGGAAGGTG CCATAAAACG ATATGGACAT
TGCTCTGGAC CTGTTCAGGA ACGACTGGAA TACGAACTAA ATGTTATTGG CAAAATGGGG
TACGATGAGT ATTTTCTAAT TGTATGGGAC TTTATCCATT ATGCTCGGCA GAAGGGTATT
GCTGTTGGGC CCGGGCGGGG TTCTGCTGCC GGGAGCATTG TTTCTTACGC CCTGGGTATT
ACCAATATTG ATCCCCTGAA ATATGGCCTG TTGTTTGAAC GGTTCTTAAA TCCAGAGCGT
ATCTCCATGC CGGATATTGA CATCGACTTT GACTACGAGC GCCGGGGAGA AGTCATTGAA
TATATTGTGC AAAAATATGG TACGGACCGG GTAGCCCAGA TCATTACCTT TGGAACCATG
GCTGCAAGGG CAGCCATTCG GGATGTAGGC CGAGCTCTGG ATATGCCCTA TGGTGATGTG
GATCGGGTAG CAAAATTAGT GCCAACGGAG CTTAATATAA CCATTGCCAA AGCACTTACA
AGTTCACCGG ATTTAAAGGC AGCTTACGAC CAAGACCCCG AAGTTAAACG GCTGGTTGAT
ACTGCCGCTG CATTAGAGGG AATGCCAAGA CATGCTTCCA CCCATGCTGC CGGGGTGGTA
ATATCCCGGG AGCCTCTGGT GGAATACCTG CCCTTGAGCA AAACCTCAGA TGGTTTGGTG
ACCACCCAAT TTCCCATGAC CACAGTGGAG GAACTGGGTC TATTGAAGAT GGATTTGCTG
GGGCTACGCA ACTTAACTGT AATTTCAGAA ACCGTCAATT TAATTGAGCA AATAAAAGAA
ACTAAACTAG ATATTAATAC GATTCCCTTA GATGATCAAG CAACCTTTGA TATGCTTACC
CGGGGTGAAG GAGTTGGCGT ATTCCAGTTA GAAAGTAGCG GCATGCGCAA CATTCTAAGG
GAACTAAAAC CCAATGCCTT TGAGGACATT GTAGCCTTGG TTGCTCTTTA CCGCCCGGGT
CCCCTAGGCA GCGGCATGGT GGAGGATTTT ATCCAGCGCA AACACGGGCA AAACAAGGTG
GATTATTTTC ACCCAGATCT GGAACCAATT CTGAAGGAAA CCTATGGAGT TATTCTATAC
CAGGAACAGG TTATGATGAT TGCCAGGATC ATGGCCGGTT ACTCCCTTGG GCAGGCCGAT
GCATTACGCA AGGCCATGGG TAAAAAGATT GCTAAAATTA TGGGCATGCA TCGGGACTGG
TTTATTAACG GCAGCACCCT TGACGATAAG GGAAAGCCCC TGAAAAACCC CATTCCTGGA
GCTGTGGCTA GGGGCTATAG TAGGCAACTG GCAGAAAAGA TGTTTGATCT GATGGAATAC
TTTGCGGGTT ATGGTTTTAA TAAATCGCAC TCTGCTGCTT ACGCCTTAGT TTCCTACCAA
ACTGCCTATT TGAAAGCCAA TTACCCGGTT GAGTACATGG CGGCCCTGCT TACCTCGGTA
CGGGACAATA CAGATAAAGT GGTCCTGTAT ATAGATGAAT GCCGTCGTAT GGGAATACAG
GTGTTGCCAC CGGATATTAA CTTGAGCCGG GAAAACTTTA CAGCTGCCAA TGGTGCCATT
CGTTTTGGTA TGGCAGCGGT GAAAAACGTT GGCTGGGGTG CTGTTCAAGA GATAATACAA
ATTCGGGAAA AGAAAGGTCC ATTTACTGGA TTCTATGATC TCTGTGGTCG TTTGGACACC
CGAATAGCCA ACCGAAGGGT GTTGGAAAGC TTGATTAAGG CCGGGGCATT GGATGCCTTT
GGCTACCGAT CCCAGCTTCT TGCTGGTTTG GACACTGGCC TTGAGCATGC TGCCCGTTCA
CAGCGGGACC GTGAGCAAGG TCAGGTAAGC TTATTTGACC TGATGTCTGA AAGTCCGGCC
CAGGTGATGG AACTTAAGCT GCCTCATGTT CCTAGGTTAA CGTCACGACA ACAACTGGAA
ATGGAAAAGG AAGCACTAGG ATTGTATATT TCCGGGCATC CACTGTCAGA ATTCGGTTGG
CTGCTGGATC AACTGGAGGT TCAGCGGGTG GTGCATTTGG CAGAGCTCCC CGACGGTAAT
AACCTGTTGG TGGCGGGAAT CATTTCTACC ATCAAACGGA TAACCTCCCG CAAGGGAGAC
CCAATGGCCT TTTTGACCCT GGAAGATTTG ACGGGAAGTT GTGAAGTTGT TGTCTTTCCG
CAAGTATACC GTCGTCATTT TAGTCTACTG GATTTAAAAG TCCCACTTTT ATTAAAGGGA
AAATTGAACA ACAACGGTGA AGAGACTAAA ATACTGGCGG AGGAAATCCA GCCGCTGGAG
AATGTTACCT GCGAACTGTG GTTAAGGTTA TCAGAGAATG TCATATCAAA AGAACTGGAA
GAACGCCTGA TATCGCACCC GGGAAGCTCG CCAGTATTTC TCTTTTACCC AGAAGACAGG
CATAAAGTGC AATTGGAAAA AGAGGTTTCC TTAAGCCTAA ATTTAAAACG ATCCCTTACA
AGCCTTCTGG GGGAAGACAA TATACTATTG CGTTTTAACC AGCCATTGAA AGCACCAGTG
GCTGCTGCCC GGGATACCTC CCGTGTCAAA GAAGTTCCTG GTAGGTATAC CGTAGCTAAA
ACCGTGAAAG CATCGCAACC AGAACAGCCT AAGATTAACC CTTTGCCCCG CAGTGGGTTG
GTGAAGCCGG TAACGATCTC CAGCGGGCCC TTTGATCCGG ATACTTACCC GGTGCCGGAA
AGTTTGCTGG ATCTATAG
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| Protein sequence | MLEGKVVPEN QFVHLHVHTE YSLLDGASRI NQMAKQAKES GMNSLAITDH GCMFGVVDFY
KVCHKEGVKP ILGCEVYVAP RRRIDRTPKL DDQPNHLVLL AENQEGYKNL LKLVSLGYTE
GFYYKPRVDK ELLQRYHKGL IALSACLAGE VADKILGSQP EKARQAAREY VDIFGKDNFF
LELQDHGYQE QRTVNRELLK IAKELQIPLV ATNDVHYLKR EHAEIQDVLL CIQTGKSINT
PGRMKFESQE MYLKSPHEMN LLFAEIPDAL SNTLRIAERC QVDLEFGKYH LPYFTVPEES
SPAQYLREKC LEGAIKRYGH CSGPVQERLE YELNVIGKMG YDEYFLIVWD FIHYARQKGI
AVGPGRGSAA GSIVSYALGI TNIDPLKYGL LFERFLNPER ISMPDIDIDF DYERRGEVIE
YIVQKYGTDR VAQIITFGTM AARAAIRDVG RALDMPYGDV DRVAKLVPTE LNITIAKALT
SSPDLKAAYD QDPEVKRLVD TAAALEGMPR HASTHAAGVV ISREPLVEYL PLSKTSDGLV
TTQFPMTTVE ELGLLKMDLL GLRNLTVISE TVNLIEQIKE TKLDINTIPL DDQATFDMLT
RGEGVGVFQL ESSGMRNILR ELKPNAFEDI VALVALYRPG PLGSGMVEDF IQRKHGQNKV
DYFHPDLEPI LKETYGVILY QEQVMMIARI MAGYSLGQAD ALRKAMGKKI AKIMGMHRDW
FINGSTLDDK GKPLKNPIPG AVARGYSRQL AEKMFDLMEY FAGYGFNKSH SAAYALVSYQ
TAYLKANYPV EYMAALLTSV RDNTDKVVLY IDECRRMGIQ VLPPDINLSR ENFTAANGAI
RFGMAAVKNV GWGAVQEIIQ IREKKGPFTG FYDLCGRLDT RIANRRVLES LIKAGALDAF
GYRSQLLAGL DTGLEHAARS QRDREQGQVS LFDLMSESPA QVMELKLPHV PRLTSRQQLE
MEKEALGLYI SGHPLSEFGW LLDQLEVQRV VHLAELPDGN NLLVAGIIST IKRITSRKGD
PMAFLTLEDL TGSCEVVVFP QVYRRHFSLL DLKVPLLLKG KLNNNGEETK ILAEEIQPLE
NVTCELWLRL SENVISKELE ERLISHPGSS PVFLFYPEDR HKVQLEKEVS LSLNLKRSLT
SLLGEDNILL RFNQPLKAPV AAARDTSRVK EVPGRYTVAK TVKASQPEQP KINPLPRSGL
VKPVTISSGP FDPDTYPVPE SLLDL
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