Gene Dred_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2305 
Symbol 
ID4958114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2520342 
End bp2521844 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content40% 
IMG OID640181477 
Productferredoxin 2 
Protein accessionYP_001113640 
Protein GI134300144 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGCCA TCGTTGCTCC ATCGTACTCT GCATCCTTTG CCTTATCCGC AGGTAAAATG 
GTATCCTCCC TGAAGAAACT TGGATTTTCT AGTGTTCAGG AAGTGGCATA TGGAGCAGGA
ATATGTGCCA GAGAATATAA AAAATATTTC TATCAAGTTA GTAGAAAACA GCCAATTATA
TCAACTGCTT GCCCGGCTGT TGTTCAACTG GTTGAAAAAT ATTTCCCCCA ATTATTAGAT
TGCTTGGCCC CCATTGATTC TCCTATGTTA ATCCAGGCAA AGATCATAAA GCGTGTTTAC
CCGGATTATA AAATAGTATT TATTGGACCT TGTCTGTCGA AAAAAAATGA ATCAATCGAT
CCTAATACCA GTGGCTATGT TGATGCAGTA ATTACCTTTA AACAACTTGA GCAGTGGTAT
AATCAGGAAG AAATGGAATG GCAACAGCTC AGTGAAGAAC CTTGGGAAAA TCCACAACCA
GATATAGCAA GGACTTTTCC CATCAGTGGA GGTCTGTTAA AAACCTCTGG TATTAATGAA
GATATTGCCA GCATGGAAAT TGTAGTGGTG GAAGGGGCCC GGCATTGCAT TGAGGTGTTA
AGGGCCATTG ACAGCGGAGA GTTTACACCT CGGTTTGTTG ATATGCTGGT ATGTGAAGGC
TGTGTGATGG GACCAGGCAT GGTGAGTGAA AAACCATCGG TGGTAAGGTC CCAGTTGGTT
TTTAATACTG TTAAGAATAA CAATAACCTC CCCCCGAATG AAGAATTTTT GCAGAAGATA
AAGGAACTAA CTTTTCAGCG CACCTTTAAG GCAAAACCAA TTGTAAAAAA GGAATTTACT
GATGAACAAG TTTGGCAAAC ATTAAGGGAA ACCGGTAAAC TTAGTGCAAG GGATCTGGTT
AATTGCAGCG CCTGTGGTTA TGATACCTGT TGGGAAAAAG CTGTTGCTTG TTTGCAGGGT
ATGGCAGAAA AAGAAATGTG TCTCCCCTTT CTCCTGAGTC AGGTGCCAGC CTTAACCAAT
AGTCTTATGG ACATGAGTAA TAAGTTAATG CTTTCGATGG AATCTATTAA TTTTTCAACC
CTAACCCTTA AGGGATCCAC ATCAAAAATG AATGTTCGTA ATCAACATTT GGAGGGGCTA
ATTAAAGAGA CCAATACCAT TGCTAAAGAC ACACTAGAAC TGGCCAATAA AGTTTTAGAT
ATGGTATCAC AGTATCAATG TCCTACCAAT CAAGATACAG GGGAAACAAC TACCCTGAGT
CCTGACTTAG AAGAAATTAA AAAGATTGCT GCTGAAACAA AGTTGCAATC CGAACAAGCC
ACCAATGCCT TTGCAGATAT TGCCAGTGTT TTAAATAGTC TTAGAGAAGA TAGTGTAATG
ATTTTGGAAC AGGAAAAGGC CATTAAGGTT GTAACAAATT CCCTGGAACA GATCGTTGCT
ACCTATGATC AACTTCTGAA CATTGGTTCT GCAATGGCCA ATATTGGAAG AAACTATGTA
TAA
 
Protein sequence
MAAIVAPSYS ASFALSAGKM VSSLKKLGFS SVQEVAYGAG ICAREYKKYF YQVSRKQPII 
STACPAVVQL VEKYFPQLLD CLAPIDSPML IQAKIIKRVY PDYKIVFIGP CLSKKNESID
PNTSGYVDAV ITFKQLEQWY NQEEMEWQQL SEEPWENPQP DIARTFPISG GLLKTSGINE
DIASMEIVVV EGARHCIEVL RAIDSGEFTP RFVDMLVCEG CVMGPGMVSE KPSVVRSQLV
FNTVKNNNNL PPNEEFLQKI KELTFQRTFK AKPIVKKEFT DEQVWQTLRE TGKLSARDLV
NCSACGYDTC WEKAVACLQG MAEKEMCLPF LLSQVPALTN SLMDMSNKLM LSMESINFST
LTLKGSTSKM NVRNQHLEGL IKETNTIAKD TLELANKVLD MVSQYQCPTN QDTGETTTLS
PDLEEIKKIA AETKLQSEQA TNAFADIASV LNSLREDSVM ILEQEKAIKV VTNSLEQIVA
TYDQLLNIGS AMANIGRNYV