Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2227 |
Symbol | |
ID | 4958550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2433659 |
End bp | 2434675 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640181401 |
Product | hypothetical protein |
Protein accession | YP_001113565 |
Protein GI | 134300069 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00471107 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGT CATTTGTAAG AATCTTGGTA GGATTGTGTT GTGCAACATT GTTTCTTGGT ATTTTATCCG GCTGTTCTTT GACTTCTAAG GAGTCAACTG AAGCCACCAG TGGCACGGAG AAAATGTATA AAATCGGTAT AACGCAGATA GCAGATCATC CATCTTTAGA TAATTGCCGT GAGGGTTTCA TTGAAGGGCT AAAAGCAGAG GGTTTTGAAG AAGGGAAAAA CGTTACCTTT GATTACAAAA GTGCCAAAGG CGAAATAGCA ACAGCAAACA CCATTGCAAC AAGCTTTGTT GGTAATAATT ATGATCTTAT TTGTGCAATT GCAACTCCAT CTGCTCAGAC AGCTTATACA GCCGCAGCTG AGAAAAAGAT ACCAGTTATT TTCTCAGCTG TTTCTGATCC AGTTGCTGCA AAACTTGTCA ATTCCCTTGA AAAACCCGGC AAAGGTTCAA CCGGCACAAG TGATATTATC CCAGTTGAAA AACAACTGGA AATGATCAGG GCCTTTATGC CAAAGGCGAA AAAAGTAGGT ATTCTATACA ACACCAGTGA ACCGAATTCT GCCACTCAGA TTGCTATGTA TGAAGCTGCT GCGGCAAAAT TCAATTTTGA AATCGTTAAG GTTGGCGTTG CGGCCCAAGC CGATATTCCC ATGGCCACCG ATAACATTTT AGCAAAGGTT GATTGTATAA CCAACCTTAC CGATAACCTT GTTGTTTCCA ATCTTCAAAC GGTGTTAGGT AAAGCAAATG CAAAGAAAAT TCCTGTATTT GGCTCAGAAG AAGAGCAGGT AAAAAATGGC TGTCTTGCTT CCCAGGGTAT CGATTATATC AAGCTGGGTA TGCAAACTGG TAAAATAGCC GCCAGGGTTT TAAAAGGTGA AGATATTAAT AATATCGCCG TCGAAACAAT CAAAGAAAGT AAATTAGTTG TTAATGAGAA TGTTTTGAAA AACTTGAGCC TTACACTACC GGCAAGCCTT AAAGATACTG CACAAATGGT GAAATAA
|
Protein sequence | MNKSFVRILV GLCCATLFLG ILSGCSLTSK ESTEATSGTE KMYKIGITQI ADHPSLDNCR EGFIEGLKAE GFEEGKNVTF DYKSAKGEIA TANTIATSFV GNNYDLICAI ATPSAQTAYT AAAEKKIPVI FSAVSDPVAA KLVNSLEKPG KGSTGTSDII PVEKQLEMIR AFMPKAKKVG ILYNTSEPNS ATQIAMYEAA AAKFNFEIVK VGVAAQADIP MATDNILAKV DCITNLTDNL VVSNLQTVLG KANAKKIPVF GSEEEQVKNG CLASQGIDYI KLGMQTGKIA ARVLKGEDIN NIAVETIKES KLVVNENVLK NLSLTLPASL KDTAQMVK
|
| |