| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2215 |
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| Symbol | |
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| ID | 4956762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2423658 |
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| End bp | 2425229 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181390 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001113554 |
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| Protein GI | 134300058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGTTC TTGCCTTTGT TTTATGGGGG GCCTTTTTTC CAGAAAGCCT TGGTCAGCAA
GCAAACAGTA TATTAGGGTT TATGACGGAG AAGTTTGGTT GGTTTTATCT TTTAGCTACC
TTTGGTTTTT TAGTGTTTGC TATTTACCTG GCATTTAGCA AATACGGAAG AATCCGCTTG
GGGGATGATG ATGACAGGCC GGAATATTCC AATATTACTT GGTTTGGCAT GTTGTTTAGC
GCGGGAATGG GAATCGGGCT GGTGTTCTGG GGTGTTGCAG AACCAGTAAG CCACTACACA
AATCCTCCCC AGGGTTTGCA GGGTGGAACA GCGGAAGCTG CCCGGACGGG TATGCTTTAT
GCCTTTTTTC ATTGGGGTTT TCAGCCCTGG GCCATCTACA CAATCATTGC TTTATCATTG
GCATACTTTA ATTTCCGGAA GGGCTATAGA GGGTTAATCA GTTCCACCTT TTACCCATTG
CTGGGGGATC GTATCAATGG TCCCCTTGGC AAAACTATTG ACATACTGGC CATTGTGGCC
ACGGCCTTTG GCGTTGCTAC TTCCCTTGGC TTAGGAACGC TTCAAATAAA TGGTGGACTT
GCGCATCTTT TAGGTATTCC CAATAACACC TTAGTCCATA TTGTCATTAT CGTCGTTGTA
ACAGTCTTAT ACATGATTTC AGCCACCACA GGGTTGGATA AAGGGATCAA ATTTCTTAGT
AATGCCAATA TTGCAGTGGC TACGTCCCTG CTTCTATTTG TATTGTTTCT GGGGCCAACC
TCCTTTATTT TTGATACCCT GACAACCACC CTAGGAGGTT ACTTGCAAAA TATTATCCAA
ATGAGCCTCC GTTTAACTCC CTTTACTCAG AATAAGTGGA TTAGTAATTG GACCCTATTT
TATTGGGCTT GGTGGATCGC TTGGGCACCC TTTGTGGGCA TGTTTATTGC CCGGGTTTCT
AAGGGGAGAA CAATCAAAGA ATTTATCTTA GGAGTTCTAT TAGTGCCCAG TCTGTTTAGC
TTTTTCTGGT TTTCTACCTT TGGAGGAACA GCTTTAAACC TTGAAGTTTT TGGCCATAAG
GCTATTGCGG CAGCTGTCCA AGAGGATATT ACTTCGGCAT TATTTATTAC CTTGGAGAAA
CTGCCCTTGG GAACAATATT GGCAGCCACA GCAACCCTCT TAATTATAAC TTTTTTTGTT
ACCTCTGCAG ATTCTGCCAC CTTTGTTTTG GGGATGCTTT CCTCCAAGGG GGATAACAAC
CCCACCAATA GGGTGAAGCT TACCTGGGGA ATACTTCAGT CTTCTATTGC CACTGTCCTA
TTATTGAGCG GCGGATTACA GAGTTTACAG ACTGCCTCAA TTGTTACAGC ACTACCCTTT
GCCCTCATAA TGGTATTCAT GTGTTTTTCT ATTATGAAGG CCCTTGAAGA TGATTATGAT
GATATGGAAA GGGAATATCG AAAGCGGACT GGAACCAGGA TTGCCCTTAA ACCTTTACCA
GATGGGAAAA AAAGGGCAGT AGAACAAAAA AGTAATAACA AGACAGTTGA AATCCCGCAA
TCCCGTAAGT GA
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| Protein sequence | MIVLAFVLWG AFFPESLGQQ ANSILGFMTE KFGWFYLLAT FGFLVFAIYL AFSKYGRIRL
GDDDDRPEYS NITWFGMLFS AGMGIGLVFW GVAEPVSHYT NPPQGLQGGT AEAARTGMLY
AFFHWGFQPW AIYTIIALSL AYFNFRKGYR GLISSTFYPL LGDRINGPLG KTIDILAIVA
TAFGVATSLG LGTLQINGGL AHLLGIPNNT LVHIVIIVVV TVLYMISATT GLDKGIKFLS
NANIAVATSL LLFVLFLGPT SFIFDTLTTT LGGYLQNIIQ MSLRLTPFTQ NKWISNWTLF
YWAWWIAWAP FVGMFIARVS KGRTIKEFIL GVLLVPSLFS FFWFSTFGGT ALNLEVFGHK
AIAAAVQEDI TSALFITLEK LPLGTILAAT ATLLIITFFV TSADSATFVL GMLSSKGDNN
PTNRVKLTWG ILQSSIATVL LLSGGLQSLQ TASIVTALPF ALIMVFMCFS IMKALEDDYD
DMEREYRKRT GTRIALKPLP DGKKRAVEQK SNNKTVEIPQ SRK
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