Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2163 |
Symbol | hemC |
ID | 4956247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2367344 |
End bp | 2368273 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640181339 |
Product | porphobilinogen deaminase |
Protein accession | YP_001113505 |
Protein GI | 134300009 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.138876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATA AAATAACCGT TGGCAGCAGG GACAGTGCGC TGGCACTGTG GCAAACTCGC TGGGTAGTTG AACAGCTGGA AAAACAAAAC CCTGATGTTA CCTTTGAAAT TACAACCATG AAGACTAAGG GAGACAAAAT GTTGGATGTG GCCCTGGCCA AAATTGGGGA TAAAGGTCTA TTTACCAAAG AATTAGAAGT GGCTATGTTG CAGAAGGAAA TCGATTTTGC AGTGCATAGT CTGAAGGATA TGCCCACTGC TTTGCCAGAA GGCTTAATCA TTGGTGCAGT ATGCAAGCGA GATAACCCCG GCGATGCACT GATTTCCAAG GATGGACGGA AATTAGATGA GCTTCCTAAG GGTGCTAGAA TCGGTACATC TTCTTTACGC CGCTGTGCGC AGTTATTAAA CTACCGTCCG GATTTTCAAC TGGAGGCCCT ACGGGGTAAC CTGAATACAC GTATGAAAAA GTTGGTGTCC GAGCAACTAG ATGGCATTAT TCTGGCTGCA GCGGGCATAA CCCGCATGGG CTGGGAAGAT ATGATTGCGG AAATTATTCC CTTTCAGGTT TGTCTACCGG CAGTGGGACA GGGTGCCATT TCTGTGGAAT GTCGGGAGGA CGATCCAGAA ATTCTTAATC TACTTAAAGG TATTGAACAT ACAGAGACCA AAGCTGCCAC TGAAGCAGAA AGGTCATTAC TCCGTTACTT AGAAGGCGGT TGCCAGGTGC CCATTGGAGC CCACAGTGAA GTTAAGAATA ATAGGCTTAT GCTCACCGCT GTTGTGGCCA CCCTAGATGG GACTAAAGTT ATTCGGGCCC AAGGAGAGAA CGAGGTTAAC AAGGCGGTGG AATTAGGTAT TGAAGTGGCT GAGAAACTAA TGGCAATGGG CGGTAAAAAA ATACTGGAAG AAGTTAGGGC GGGGGAATGA
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Protein sequence | MKHKITVGSR DSALALWQTR WVVEQLEKQN PDVTFEITTM KTKGDKMLDV ALAKIGDKGL FTKELEVAML QKEIDFAVHS LKDMPTALPE GLIIGAVCKR DNPGDALISK DGRKLDELPK GARIGTSSLR RCAQLLNYRP DFQLEALRGN LNTRMKKLVS EQLDGIILAA AGITRMGWED MIAEIIPFQV CLPAVGQGAI SVECREDDPE ILNLLKGIEH TETKAATEAE RSLLRYLEGG CQVPIGAHSE VKNNRLMLTA VVATLDGTKV IRAQGENEVN KAVELGIEVA EKLMAMGGKK ILEEVRAGE
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