Gene Dred_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2156 
Symbol 
ID4958261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2360245 
End bp2361543 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content49% 
IMG OID640181332 
Productglutamate-1-semialdehyde-2,1-aminomutase 
Protein accessionYP_001113498 
Protein GI134300002 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCCA GCTACCAAAA ATCAGAGGAA ATGTTTGAAC AAGCCCAAAG GATTATCCCT 
GGCGGTGTAA ACAGCCCCGT ACGAGCCTTT AAATCCGTAG GGATGAACCC ACCCTTCATT
GCTAGGGCTA ATGGTTCCCG TATGTGGGAC GTGGATGGCA ATGAATATAT CGACTATATT
TGTTCCTGGG GACCGCAGAT TCTAGGACAT CGTCACCCTG CGGTGATTCA CGCCCTTCAA
GACTGCTTAG AGAAAGGAAC CACCTATGGG GCTCCTACGG ATCTGGAGGT AACCCTGGCT
CAAATGTTGA CAGAGGCATT ACCATCGGTG GAAATGGTTC GCATGGTGAA CTCTGGTACA
GAGGCAACCA TGAGTGCCCT GCGCTTAGCC CGAGCCTATA CAAATCGAAG CAAAATTATA
AAATTTGAAG GCTGTTACCA TGGCCACCAT GATTCCCTTT TGATTAAAGC CGGTTCAGGA
GCCCTTACCC ATGGTGTTCC CACCAGCCCA GGGGTGCCAG AAAACATTGC CAGCAATACA
ATTAATGCAC GTTATAATGA TCTGGAATTG TTGGAGAAGA TCTTTACTGA AGTGGGTTCG
GATATAGCAG CTATTATTGT GGAACCCTTA GCAGGAAATA TGGGGGTTGT TCCTCCAGCA
GAGGGTTTTC TGCAGGGACT AAGGGACCTT TGTAACAAAC ATAGTGCCCT GTTAATTTTT
GATGAAGTTA TTACAGGTTT CCGCTTAAGT TATGGGGGTG CTCAGGCCTA TTATAATGTT
ATGCCTGATT TAACCTGCCT GGGTAAAATC ATAGGTGGCG GGTTACCTGT GGGGGCATAC
GGTGGCCGCA GGGAGATTAT GCAGATGGTT TCTCCTGCGG GTCCGGTGTA CCAGGCAGGA
ACGCTTTCCG GCAATCCTTT GGCGATGACT GCGGGTATCG CAACCCTTAA GCAATTACAG
CAACCGGGTG TTTATGAAGA GCTTGATTAC AAGTCAGACC TCCTGGCCCA GGGTTTGATT
CAAGCTGCGA AAGCGGCTGG TGTGGAGGCA TCCTTTAACC GGGTACAATC CTTGCAAACC
TGTTTCTTCA CCCAGCAGGA TGTAAGGGAC TTCGCCACAG CTTCCTCCTC TGATACCAAG
CAGTATGCAG CCTTCTTTAG AAACATGTTG GAGCAGGGTA TTTACCTGGC ACCTGCACAG
TTTGAAGCAA CCTTTGTTTC ATTGGCCCAT ACTGAGAATG ATATAGAGCG TACAGTGGAA
GCGGCCTTTA ACGCCTTTAG GGCTGCTGCA AAGGAATAA
 
Protein sequence
MAPSYQKSEE MFEQAQRIIP GGVNSPVRAF KSVGMNPPFI ARANGSRMWD VDGNEYIDYI 
CSWGPQILGH RHPAVIHALQ DCLEKGTTYG APTDLEVTLA QMLTEALPSV EMVRMVNSGT
EATMSALRLA RAYTNRSKII KFEGCYHGHH DSLLIKAGSG ALTHGVPTSP GVPENIASNT
INARYNDLEL LEKIFTEVGS DIAAIIVEPL AGNMGVVPPA EGFLQGLRDL CNKHSALLIF
DEVITGFRLS YGGAQAYYNV MPDLTCLGKI IGGGLPVGAY GGRREIMQMV SPAGPVYQAG
TLSGNPLAMT AGIATLKQLQ QPGVYEELDY KSDLLAQGLI QAAKAAGVEA SFNRVQSLQT
CFFTQQDVRD FATASSSDTK QYAAFFRNML EQGIYLAPAQ FEATFVSLAH TENDIERTVE
AAFNAFRAAA KE