Gene Dred_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2090 
Symbol 
ID4955321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2286172 
End bp2286636 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID640181259 
Productriboflavin synthase 
Protein accessionYP_001113432 
Protein GI134299936 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0406951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAG TATTTGAAGG ACATTTACTG GGACAAGAAT TAAAGTTTGG TATTGTTGTT 
GGTCGTTTTA ACGAATTTAT TACTAATAAA TTGTTAAGCG GAGCACTAGA TGCCTTGAAA 
CGTCATGGCG TAGAGGACGA AAATGTTGAA ATTGCTTATG TTCCCGGGGC CTATGAAATT 
CCTTTGGTGG CAAAGAAAAT GGCTGATAGC AAACGTTACG ATGGCGTTAT TTGCTTGGGG 
GCGGTAATTC GTGGCGCAAC CCCTCACTTT GAATACGTAT CAGCGGAAGT TTCCAAAGGG 
GTGGCAAAGA TCAGTTTGGA TAGCAATCTG CCGGTGATCT TTGGCGTACT GACCGTAGAT 
ACCATCGAAC AGGCCATCGA GCGGGCTGGT ACCAAGGCTG GCAACAAAGG TTGGGAAGCT 
GCCAATGCTG CCATTGAAAT GGCCAATTTA TTAAAAACTA TCTAG
 
Protein sequence
MPKVFEGHLL GQELKFGIVV GRFNEFITNK LLSGALDALK RHGVEDENVE IAYVPGAYEI 
PLVAKKMADS KRYDGVICLG AVIRGATPHF EYVSAEVSKG VAKISLDSNL PVIFGVLTVD 
TIEQAIERAG TKAGNKGWEA ANAAIEMANL LKTI