| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2079 |
|---|
| Symbol | |
|---|
| ID | 4957183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2275326 |
|---|
| End bp | 2275826 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001113421 |
|---|
| Protein GI | 134299925 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0352499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCATTA ATATCCTAAA AATTAGGAAC GCCCCTGGTG AGAAAATAAG CTTTCATGTC
AGTGAGCAAA TTGACAGTGT GGCGGTAAGC GGCCAAAGGT TTTCATTTGT TGGAGCTGTG
GAGGTATCTG GAGAAGTTAT AAACCAGAAT AATCAATTTC TGGTAAAGGG ACAGACCAGA
GCGGTGGTTA GCAGTGACTG TGTAAGTTGT TTAGAACCTG TGCAACTTAC AATACAGGGA
ACAATCGATG AGATCTATGG CAAGAGCAAT GGTCATCAAG ATCCCGATGG CGAAATAATT
GGGTTCGATG GGGATGTCCT AAACATTGAA CCGGAAGTCA TTAAGTCGTT GTTAATGGAA
ATACCCATGA GGGTGGTTTG TTCACCTGAT TGCCGTGGTT TATGCCAAGG GTGCGGGTGC
AACCTGAATA TAAAGCAGTG TGACTGCGAA AATGAAACCA TTGACCCAAG ATTAGCCATA
CTTAAAAAAT TACAACAATA A
|
|---|
| Protein sequence | MIINILKIRN APGEKISFHV SEQIDSVAVS GQRFSFVGAV EVSGEVINQN NQFLVKGQTR
AVVSSDCVSC LEPVQLTIQG TIDEIYGKSN GHQDPDGEII GFDGDVLNIE PEVIKSLLME
IPMRVVCSPD CRGLCQGCGC NLNIKQCDCE NETIDPRLAI LKKLQQ
|
|---|
| |