| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2051 |
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| Symbol | trmD |
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| ID | 4957897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2248767 |
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| End bp | 2249531 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181220 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001113393 |
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| Protein GI | 134299897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000193213 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATAG ATATTCTGAC ACTTTTTCCT GAGATGTTTC AAGGACCGTT CAACCACAGT
ATTCTCAAGA GGGCCCAGGA AAACAATCTT CTACAAATCG ACACTATCAA TATACGGGAT
TTTTCCCAAA ACAAACACCA TACAGTGGAT GACACTCCCT ATGGCGGTGG TGCAGGCATG
GTGATGGGTC CGGAGCCTTT GTTTGAATGC TTTGATCACC TAAAAGCAAA GAACGCTGGT
CAGGTTGGCC GGGTAATCAT GATGTGTCCC CAGGGGGAGC CCTTTACCCA AGAATATGCT
AAGGAATTGG CCAGAGAAGA AAATTTGGTT ATTGTCTGTG GCCATTATGA GGGAATTGAT
GAAAGAGTTC GAGAAGTATT GGTAACGGAT GAAATATCCA TTGGTGACTA TGTTCTCACC
GGTGGTGAAC TGCCTGCAAT GGTGGTTGTT GATGCTGTGG CCAGGATGAT TCCTGGCGTA
TTGGGTGAGA CTGCCAGTGC TGAAGAAGAC TCCTTTTATA ACGGTCTGTT GGAGCATCCC
CATTTTACTA AGCCCAGGGA GTATAGAGGT TACGAAGTGC CTGAAATTCT ACTGTCCGGT
CACCATGGGA ATATACGAAA GTGGCGCAGA CGGCAGTCCC TTCTAAGAAC CCTAGAACGT
CGACCAGAGT TACTAAAAGA TGTAGAATTA TCAAAGGAAG ATAAGAAAGT TTTACTGGAA
CTGCAAAATC TTCTGTTATC TTTAAACCTA AAGCAGATGA AATAG
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| Protein sequence | MRIDILTLFP EMFQGPFNHS ILKRAQENNL LQIDTINIRD FSQNKHHTVD DTPYGGGAGM
VMGPEPLFEC FDHLKAKNAG QVGRVIMMCP QGEPFTQEYA KELAREENLV IVCGHYEGID
ERVREVLVTD EISIGDYVLT GGELPAMVVV DAVARMIPGV LGETASAEED SFYNGLLEHP
HFTKPREYRG YEVPEILLSG HHGNIRKWRR RQSLLRTLER RPELLKDVEL SKEDKKVLLE
LQNLLLSLNL KQMK
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