Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2003 |
Symbol | |
ID | 4956874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2201638 |
End bp | 2202480 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640181170 |
Product | Ku domain-containing protein |
Protein accession | YP_001113346 |
Protein GI | 134299850 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCCC TTTGGAAAGG TGCAGTAAGT TTTGGTTTAG TGTATGTGCC GGTTAAGATG TATGCCGCCA CGGAAAAGAA AAGCATAAAA TTTAATTATC TACATGATAA ATGTAAAACA CCCATTCAAT ATCGTAGGTA TTGCCCCTAT TGTAATACGG AAATAAACAA CGAAGAAATT GTAAAAGGCT ATGAATATGA AAAGGGTAAA TATGTGGTGA TGAAAGATGA AGACTTTGAA AACTTGCCTG GAGAAAAAAC AAAAAGCATT AACATTGTTG ACTTTGTTGA TTTAACTGAT ATTGATCCTC TTTATTTTGA TAAGGGTTAC TATCTAGCGC CGGGTGAAGG GGGACAAAAG GTCTACGAAT TACTAAAAAG ATCAATGCAA GAAACTGGCA AAGTGGCGGT GGCTAAGGTT ATCATTCGGG ACAAAGAATC ACTTGCTGCT CTTAGGGTGG CTGATGGTGT TCTTACTATT AATACCATGT TTTACCCAGA TGAAGTAAGA AAACCAAGTG GTATTCCAGA ATTGGACTAT GAAATAGAAC TTCACGAAAA TGAATTGAAA ATGGCAGTAA ATCTTATTAA TAATTTATCA GCACCCTTTA AACCGGAAAA ATACACAGAT GAATATCGTC AACAACTTTT AGAAGTGATC CAGGCAAAGA TTGCTGGGGA AGAGGTAGAA GCAGTTCCTG CTGTCCAAAC CGATAAAGTG GTAGATCTAA TGTCTGCATT GAAAGCAAGT ATTGATCTGG CCAAACAGGA AAGGGATAAC GCATTAAAGA AAGATGCCAC TAAAAAGAAA ACCACCAGGA CAAAAAAGGC CACGGCCTCG TAA
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Protein sequence | MRPLWKGAVS FGLVYVPVKM YAATEKKSIK FNYLHDKCKT PIQYRRYCPY CNTEINNEEI VKGYEYEKGK YVVMKDEDFE NLPGEKTKSI NIVDFVDLTD IDPLYFDKGY YLAPGEGGQK VYELLKRSMQ ETGKVAVAKV IIRDKESLAA LRVADGVLTI NTMFYPDEVR KPSGIPELDY EIELHENELK MAVNLINNLS APFKPEKYTD EYRQQLLEVI QAKIAGEEVE AVPAVQTDKV VDLMSALKAS IDLAKQERDN ALKKDATKKK TTRTKKATAS
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