| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1967 |
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| Symbol | |
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| ID | 4956707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2161709 |
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| End bp | 2163418 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181134 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001113310 |
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| Protein GI | 134299814 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTA GTCAAATGCT CGTTCCAACT TTAAGGGAAG TTCCGGCAGA GGCCGAAGTG
GTAAGTCACC AACTATTGCT GAGAGCTGGT TTTATTCGTA AAACAGCCTC CGGTGTATAT
ACATATCTGC CATTAGCCCA ACGTGTTCTC AAAAAGTTAA GGCAAATTAT TCGGGAAGAA
ATAGACAAGC AGGGTGGGCA GGAATTGTTA ATGCCCATCA TTCAACCTGC GGAGATGTGG
TTAGAGTCCG GTCGCTGGCA TGTGTACGGT CCGGAGTTGT TCCGTCTTAA AGATCGCCAC
GATCGTAATT TCTGTTTGGG ACCCACCCAT GAAGAAGTTA TTACGATTTT AATACGTGGA
GAAGTTCGTT CGTATAAACA AATGCCCTTG TTACTATACC AGATTCAAAA TAAATATAGG
GATGAACGCA GACCTCGCTT TGGTTTGCTG CGGGGCAGAG AGTTTATTAT GAAGGACTTG
TATTCCTTTG ATAGAGACGA AGCAGGACTG GATATAAGTT ATCAAAAGAT GCATGAAGCA
TATACAAGCA TATTTAGCCG TTGTGGTGTG AAGTTTCGAC CGGTTGAGGC TGATTCCGGT
GCAATCGGCG GTAGTAGCAC CCATGAGTTC ATGGTGTTAG CGGAATCAGG CGAAGCAGCT
ATTTTGTATT GCTCTGATTG TGATTATGCG GCCAATGTTG AGAAGGCAAC AACACTGCCA
GCCGCTGGCC TTGATCCTGC AATTCAACAG CTAGAATTGC AGGAAGTAAG TACACCCGGT
AAAAAAACTG CTGAGGAAGT GGCAAAGTTC CTGGGTGTCG AGCCTTTCCA AGTGATTAAG
ACTATGTTTT ATAAAACTGA TAAAGAAGTT GTAGCAGCAC TGGTTCGTGG TGATCGTGAT
GTAAACGAAA TTAAACTGTT AAATGTCCTT GGGGCGTTGA CCCTCGATCT GGCCGATGAA
AGCACGGTTC AGCAAGTGAC AGGTGCTCCC ACTGGTTATG TGGGTCCTGT GGGACTGGAG
AACATTCGTA TTGTAGCTGA CATGGAAGTA ATGGCCCTGG TTAACGCCGT TGTAGGGGCC
AATAAACAGG ATGCTCACCT GATTAATGTT AACCCTAAGC GGGACTTCCA GCCAGAAATC
GTAGAAGATA TTCGTATGGT TAAGGCAGGA GAGCCTTGCC CTAAGTGTGG CGCACAGCTA
CTGGAGGCCC GGGGCATTGA AGTTGGTCAA ATCTTTAAAT TAGGTACTAA ATACAGTAAA
GCTTTAGGGG CTACTTTTCT GGATGAAAAC GGTAAGGAAC AGCCCATTGT TATGGGCTGC
TACGGCATTG GGGTAAGTCG TACTATGGCA GCAGCCATTG AGCAAAACTA TGACAAAGAT
GGCATTATCT GGCCTGCTAG CATTGCACCA TACCAGGCCA TTGTTATTCC TGTAGCTCCG
AAAGACGATA ACCAGATGAA AATTGCTGAG GAACTTTACA AAGCACTTAA TCAAGCTGGT
GTAGAAACCA TTCTGGACGA CCGTTCCGAA CGCCCCGGAG TGAAATTTAA AGATGCTGAC
CTAATCGGCT ACCCATTAAG AATTGTGGTT GGTAACAAAG CTGTTACCGA AGGCGTAGTG
GAAATTCGAC AGCGCCGTTC CGGGCAAACA GACCTAGTTT CTGTTAAAGA TTCTGTGCCT
AAGATATTAG AAATTTTACC AACACTGTAG
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| Protein sequence | MRVSQMLVPT LREVPAEAEV VSHQLLLRAG FIRKTASGVY TYLPLAQRVL KKLRQIIREE
IDKQGGQELL MPIIQPAEMW LESGRWHVYG PELFRLKDRH DRNFCLGPTH EEVITILIRG
EVRSYKQMPL LLYQIQNKYR DERRPRFGLL RGREFIMKDL YSFDRDEAGL DISYQKMHEA
YTSIFSRCGV KFRPVEADSG AIGGSSTHEF MVLAESGEAA ILYCSDCDYA ANVEKATTLP
AAGLDPAIQQ LELQEVSTPG KKTAEEVAKF LGVEPFQVIK TMFYKTDKEV VAALVRGDRD
VNEIKLLNVL GALTLDLADE STVQQVTGAP TGYVGPVGLE NIRIVADMEV MALVNAVVGA
NKQDAHLINV NPKRDFQPEI VEDIRMVKAG EPCPKCGAQL LEARGIEVGQ IFKLGTKYSK
ALGATFLDEN GKEQPIVMGC YGIGVSRTMA AAIEQNYDKD GIIWPASIAP YQAIVIPVAP
KDDNQMKIAE ELYKALNQAG VETILDDRSE RPGVKFKDAD LIGYPLRIVV GNKAVTEGVV
EIRQRRSGQT DLVSVKDSVP KILEILPTL
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