| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1948 |
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| Symbol | |
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| ID | 4955290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2138499 |
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| End bp | 2139248 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640181116 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001113292 |
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| Protein GI | 134299796 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02873] probable sporulation protein, polysaccharide deacetylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000715916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATAT TATTTATTCG AAGGGGCTGG TTATATAAGA CGGTTCTTTG GCTACTGATT
GTCCTCTTTT TAATTGGTTT AGGTGTTTTA GCTACCAATG AAAAACATGA AAGGGTTTTT
GCACCTATAT ATCAAGGCAG TGATAAGGAA AAGAAAATAG CTTTAGCCTG TAATGTTTTT
TGGGGAGAAG AATACATACC TAAAATGCTA GAGATTTTTG AGGATGAAAA CATTAAAATT
ACCTTCTTTG CCGGTGGCAC CTGGGTGGAA GACTTTCCTG AGTTACTTAA GAAAATGGAT
GGTGCAGGGC ATGAAATTGG CTCCCATGGT TATTCACATC CTCATCCAGA TCGCCTGAGT
AAAAATGGCA ATATAAGTGA TATGCAAAGG GCAGAGAAAC TGATCTATGA TGCAATTCAT
AAAAGACCAA AGCTATATGC ACCCCCCTAT GGAGAAAAGG GTCCAGCAGT ATTAAAGGCC
GCCCAGGAAC AGGGATATTC CTTTATACTC TGGAGTATCG ACACCATTGA CTGGCAGAGG
CCGGCTCCGG CAATAATTAA ACAAAGGGTG GTTAGTAAGG CCCATAACGG AGCAATTGTG
TTAATGCATC CAACAGACCC CACAGTTAAA GCACTTCCCG AAATGATCAA ACAATTGAAA
AGTGAAGGCT TTGAATTTGT TAAAGTGGGA GAGATTATTG AAGGTATTCC GCAAAATGTT
GAATCTGAAA AAAGAAAGAC ATATAAATAG
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| Protein sequence | MRILFIRRGW LYKTVLWLLI VLFLIGLGVL ATNEKHERVF APIYQGSDKE KKIALACNVF
WGEEYIPKML EIFEDENIKI TFFAGGTWVE DFPELLKKMD GAGHEIGSHG YSHPHPDRLS
KNGNISDMQR AEKLIYDAIH KRPKLYAPPY GEKGPAVLKA AQEQGYSFIL WSIDTIDWQR
PAPAIIKQRV VSKAHNGAIV LMHPTDPTVK ALPEMIKQLK SEGFEFVKVG EIIEGIPQNV
ESEKRKTYK
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