| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1921 |
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| Symbol | |
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| ID | 4957697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2110164 |
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| End bp | 2111762 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640181091 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001113267 |
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| Protein GI | 134299771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000118371 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACA GAAAAGAGAC AAAGCTTTTT GGAAATCTTG AATTGGATCG CAGAATTGTT
GATGGTTTAA AGGAAATGGG ATTTGAAGAA CCAACTCCTA TTCAGCAGCT GGCTGTGCCG
CAGGTTTTGG CAGGTTATGA TATGATTGGT CAAGCTCAGA CTGGTACAGG TAAAACTGCA
GCCTTTAGTA TTCCCATGAT TGAACGGTTG AATCCTAGAA AAAGAGAAGT TCAAACCATT
ATCATTACAC CTACACGTGA ACTGGCCATT CAAGTTGCAG AAGAGATTAG TAAGATTGGT
CGTTTTAGCC GCATAAAGGT ATTGCCCATA TATGGTGGAC AATCCATCGA GCGCCAAATT
CGATCTCTAC GACTAGGCGT ACAAGTGGTT GTGGGTACTC CTGGACGATT GTTGGATCAC
CTTCGGCGTC AGACATTAAA GGTTGATCAG GTTGACATGG TGATACTAGA TGAGGCAGAT
GAAATGCTGG ATATGGGTTT CATCGAAGAC ATAGAGGAGA TCATTAGACA TACTCCGGCA
GAAAGACAGA CCTTGCTTTT TTCTGCCACT ATGCCTCAGG AAATCATTAG GCTGGCTCAG
CAATATATGA CAGATCCCAA ATATGTCACT GTTAGTAAAA CCAATCTGAC GGTACCTCAA
ATTGAACAGG TCTTTTATGA GGCACCGGAA AAAAATAAGT TAGAAGCGCT TTGCAGAATA
CTTGATATAA GTGATATTTC TCAGGGTATC CTTTTTTGCC GTACCAAACG AGGTGTTGAT
GAATTGGTTG CTGGCTTGCA AGCCAGAGGG TTTGCTGCTG CTGCCCTCCA TGGGGACCTC
AGCCAACAAC AAAGAAATAC TGTCATGAGA CAGTTTCGTT CAAGTGAGGT TGAACTGTTG
GTAGCCACCG ATGTAGCAGC TAGGGGATTG GATATTGAGG GTGTTTCCCA TGTAATCAAC
TATGATATTC CTCAGGATCC AGAGTTTTAT GTCCACAGGA TTGGTCGAAC AGGTAGAGCC
GGTAGATCAG GTGTTGCCAT TACGATCATT AGCCCTCGAG AATACCGTCA ACTACGCCAA
ATTGAAAACA TAACTAAAAC CCACATTAAG AGACAAAAAC TACCCAGTAT TGCCGATGTG
GTAGAACGTC AAAAGGAAAG TATTAAGGAA AGATTGATTC AAATTATTAA TGAAGGAAAA
TTAGGTTACT ACCGTTCGGT TGTTGATGCA CTAGTAGATG AGTATGATCC GATGGATATT
GCCGCGGCAG CTCTCAAACT TTCCATGGAT TTGGAACCTA ACAGTGAGGA TGTTAATCTT
AACACTGTTA ATTTCGGCAA TACCGGTGCA AGGCCTGGTA TGGTAAGGTT ATTTCTTACA
CTTGGAAGAA AAGACCGGGT AACCCCGCCA GAGATTATTA AGCTAGTATC AGATGAATCT
GGCATCTCAG GTGGTCAAAT TGGTAACATT AACATATATG AAAATTTTAG TTTCGTTGAG
GTTCCTGAAG ATTGGGCCAA CTGTGTAATC AGTTGCTTGC ATAGGCAGCA TTTTAAAGGC
AGGAGAATAT TTGTCGAACC TGCCCGTGCC AGAAAGTAA
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| Protein sequence | MNHRKETKLF GNLELDRRIV DGLKEMGFEE PTPIQQLAVP QVLAGYDMIG QAQTGTGKTA
AFSIPMIERL NPRKREVQTI IITPTRELAI QVAEEISKIG RFSRIKVLPI YGGQSIERQI
RSLRLGVQVV VGTPGRLLDH LRRQTLKVDQ VDMVILDEAD EMLDMGFIED IEEIIRHTPA
ERQTLLFSAT MPQEIIRLAQ QYMTDPKYVT VSKTNLTVPQ IEQVFYEAPE KNKLEALCRI
LDISDISQGI LFCRTKRGVD ELVAGLQARG FAAAALHGDL SQQQRNTVMR QFRSSEVELL
VATDVAARGL DIEGVSHVIN YDIPQDPEFY VHRIGRTGRA GRSGVAITII SPREYRQLRQ
IENITKTHIK RQKLPSIADV VERQKESIKE RLIQIINEGK LGYYRSVVDA LVDEYDPMDI
AAAALKLSMD LEPNSEDVNL NTVNFGNTGA RPGMVRLFLT LGRKDRVTPP EIIKLVSDES
GISGGQIGNI NIYENFSFVE VPEDWANCVI SCLHRQHFKG RRIFVEPARA RK
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