| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1885 |
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| Symbol | |
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| ID | 4958404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2069712 |
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| End bp | 2071067 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640181056 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001113232 |
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| Protein GI | 134299736 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AAACCGGCGT TATCTTTTTT CCTGCCTTCG ATTGGGCAAT TTCGCCAACG
CACCCCGAAC GGGAGGAGCG CCTCCTTTAT ACCAGGGATC AAATGTTTGA AGAGGGTATT
TTAGATCTGC CGGAAATCCA GCAATATGCT CCACGCATGG CTTCAAAACA TGACATCGCC
CGGGTTCATT TCTGTGTGCC CAATGTAGAG GAGCAAGTTT TAGATGCACA TCGGATTGCA
GCCGGAGCGG CCATTGACTT AGGCGATAGA GTGATGGCTG GGGAAATTGC CAATGGGTTT
GCCCTAGTGC GACCCCCAGG ACACCATGCC ATGCGGGTTG TTCACGGAAA TCGGGGATTT
TGCAATATTA ATAATGAAGC TGTTCTCGTC GAATATCTTA GAAAAACCTA CGGGGTTAAA
AAAATCGCCA TTGTGGATAC GGATGTTCAT CACGGAGACG GTACCCAGGA TATTTTTTAC
CATGATCCCG ATGTGCTTTT TATTTCCTTT CATCAAGATG GTCGCACCAT TTATCCGGGC
ACTGGTTTTA CCTATGAGTT AGGGGGTCCT GGCGCATACG CATCTACCAT CAACATACCC
CTACCACCCG GTGTAACGGA TTCCGGTCTG CACTATGTGA TGGATCATCT GATACTTCCT
ATCTTGAAGG ATTTCCAACC GGATTTTGTT GTCAATTCGG CAGGACAGGA TAATCACTTC
ACTGATCCTC TGGGACGAAT GAAAATCACT GCCCAGGGGT ACGCAAGGTT AACGGAAAAA
TTAAAACCAA ATCTTGCAGT CCTCGAAGGG GGTTATGCCA TTGAAACGGC GTTGCCCTAT
GTAAATCTAG CAATCCTGCT GGCCCTGGCA GGGAAGGATT ATACGTCTGT AGTTGAGCCG
GAATATAACC CTGCCAAATT TAAAGAAAGC CCTAAGGTGA CCTCGGAAAT TGGTCGTGTC
GTAGAGGAAC TGCAAGAAAT TTGGGCTAAA CGTCACCAGT TTGATAAATA CACCCTAGCT
AAGGGAACTG GTTTTTATCA GAGAACAAAG CCCATTTTTT ACGATACACA TTATATAGAA
GAAAAACAAA TTGAAAAGGT TCGGGTCTGT GATCAGTGCT CTGGGTTTAT TAGTTTAGAT
TCGCAGGCAT ACCATCCCAA TGGTAAGCAC TATAGGATTT GTGCCATCAG CATCCCCTTC
CAGTCATGCA AATCATGTCA GGCAGAGGCG TGGGAAAGTT ATGAGCAGGC CAAAGGGGAC
CCTCACTTTG ATTACATTTA TCTGCAAGAT AAATCTACTG ATACCTTTAT GATTTATCAA
CGGCTGGGCA ACAGAGAAAT ACGCTCAGAC GGTTAG
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| Protein sequence | MSKKTGVIFF PAFDWAISPT HPEREERLLY TRDQMFEEGI LDLPEIQQYA PRMASKHDIA
RVHFCVPNVE EQVLDAHRIA AGAAIDLGDR VMAGEIANGF ALVRPPGHHA MRVVHGNRGF
CNINNEAVLV EYLRKTYGVK KIAIVDTDVH HGDGTQDIFY HDPDVLFISF HQDGRTIYPG
TGFTYELGGP GAYASTINIP LPPGVTDSGL HYVMDHLILP ILKDFQPDFV VNSAGQDNHF
TDPLGRMKIT AQGYARLTEK LKPNLAVLEG GYAIETALPY VNLAILLALA GKDYTSVVEP
EYNPAKFKES PKVTSEIGRV VEELQEIWAK RHQFDKYTLA KGTGFYQRTK PIFYDTHYIE
EKQIEKVRVC DQCSGFISLD SQAYHPNGKH YRICAISIPF QSCKSCQAEA WESYEQAKGD
PHFDYIYLQD KSTDTFMIYQ RLGNREIRSD G
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