| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1871 |
|---|
| Symbol | |
|---|
| ID | 4958002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2057293 |
|---|
| End bp | 2057847 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640181044 |
|---|
| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
|---|
| Protein accession | YP_001113220 |
|---|
| Protein GI | 134299724 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0934233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG TTCATATATC AACACCCCTT GTGGAGGATG TTGTGAAAAG CCTTTGTATC
GGTCAACAAG TCTTAATCAG TGGGGTGATT TACACAGGGC GGGATGCAGC TCATAAAAGG
CTAGTGCAAC TGATGGATGA AGGGAAAGAA CTACCCTTTG ATTTGAAGGG ACAGATTATT
TATTATGTGG GTCCCTCACC GGCGCCTCCG GGTAGAGTAA TTGGTTCTGC TGGGCCTACC
ACCGCAGGGC GAATGGATGC CTATGCACCC CGCTTGATAG AGCGGGGACT TAAGGGAATG
ATTGGTAAAG GTGCCAGGAC AGAAAATGTA ACCAATGCCA TGAAGAAACA TGGAGCTGTA
TACTTTGCTG CCATTGGTGG AGCGGCTGCC CTTATTTCAA GAAGTGTGCA AGAGGCAGAA
ATTGTTGCTT ATTCAGACTT AGGTCCAGAG GCTATCTATC GGTTAGTGGT AAAAGACTTT
CCGGCTATTG TTGTTAATGA TGCCTTTGGT GGAGATTTAT ATCAAGAAGG TAGAAAAATA
TATGCGATAG AGTAA
|
|---|
| Protein sequence | MTKVHISTPL VEDVVKSLCI GQQVLISGVI YTGRDAAHKR LVQLMDEGKE LPFDLKGQII
YYVGPSPAPP GRVIGSAGPT TAGRMDAYAP RLIERGLKGM IGKGARTENV TNAMKKHGAV
YFAAIGGAAA LISRSVQEAE IVAYSDLGPE AIYRLVVKDF PAIVVNDAFG GDLYQEGRKI
YAIE
|
|---|
| |