| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1853 |
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| Symbol | |
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| ID | 4955399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2034269 |
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| End bp | 2036356 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640181026 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001113202 |
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| Protein GI | 134299706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.989434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC TAATTCTTGC GGAAAAGCCA TCAGTGGGGA GGGATATTGT AAATGCCATT
GGTGGTCATT TTGAAAAAAG GGATGGGTAT TATGAAAATA GTCAGTATAT TATTAGTTGG
GCCATCGGGC ATCTGGTTGA ATTATGTGAA CCAGAGGATT ATCAACCTAA CTTAAAAAAA
TGGACTCTCT CAGCTTTACC CATTATTCCA GAATGCTTCA AACTAAAACC CAACCCTAAA
ACAATTAAAC AGTACAAAGT AGTTAAACAA CTTCTCAACC GGCCTGATGT GGAACTAATT
GCTGGGACGG ATGCAGGGCG TGAAGGAGAA CTGATCTTAA GATATATTAT GCGTTTATCA
GGATACAGCA GGCCCTTTAA ACGGCTCTGG TTGTCAGAGA CAACACCAGA ATCCATCAGA
AAAGGACTGG CCAATCCGTT GCCAGGGCAG GCTAAGGATC TACTGGCTGC TGCAGCGGAG
TGCAGATCCC ATGCAGACTG GTTAATTGGT ATCAATGCTA CTCGAGCCTT TACCAAAAAG
CACGGAGATT TATTTTCAAT AGGACGTGTA CAAACTCCAA CCTTAGGACT TATTGTAGCC
AGAGAAAAAG AGATTAAAAC GTTTATACCC GCCCATTACT GGGAATTATA TGCAGATTTT
GTCACAACTG ATGGTCAGGT TTATCGTGGC AAGTGGTTTA AAAATAAAAA CAAAAACCGA
TTTAACCAGG AGGCAGACGG CATAAGCATC AAAAATAAAA TTGTGGGACA AGATGGCTCG
GTCATTAAGG TCGAGGAAAA AGCAGTGTCT GAACCACCGC CCACCTTGTT TAACTTGAAT
GATTTACAAA AGGAAGCCAA TAAAAAGTTT GGCTTTACTG CAAGCCAGAC CTTAGAAATA
GCCCAGGCAT TATATGAAAA ACACAAACTA TTAAGTTATC CTAGAACAGA GTTTAAACAC
CTTACGAACG AATTGGCTAA GACAATTCCT TCTCGGTTAT CAGCCCTGGG GTCAGTGTCT
GGCTATTCTA AGTTTGTGGC CTACGCCCAA AGTGCCCCGA AACCGGGGAA GAGGTTCATC
GATGACGCCA AGGTCGGAGA TCACCATGCA TTGATTCCGA CAAATGTTAA GCCAACCGCC
GCGCTGTCCC CCAATGAAGC TAAAATTTAC AATATGGTGG CCCGTAGATT TTTAGCAATG
TTTTTTCCTG CGGCGGAATA CAAGCAGACA AAAATCATGA CTTCTGTGTC AGACGAAACA
TTTCTAACAT CAGGCAAGAT TGAACTAAGC CCAGGGTGGA AGGAAGTAAT ACCTCCATTA
AAAGGTGAGA ATAAGGAAAA AAGTGACGAG GAAGTCTTGC TCCCTCCCTT AACGAAGGGG
GAGAATGTTG CAGTAACCAA AGCTAAATTG CAACAGAAGA AAACGGAGCC TCCGAAAAGG
TATACAGAGG GAACACTACT GGCGGTTATG GAAGGGGCAG GGAAGTTTGT AGATGATAAG
GCATTGAAGG ATGCCATGAA AGGACACGGA CTGGGAACAA GTGCAACCAG GGCGGCAATA
ATTGAAAGAT TAATTAAAGT GGGATACGTA GAGAGAAAGA GCAAGACTTT AATACCAACC
CAAAAGGGTG AAACACTTAT TAGTTTGGTG CCAGAAGTGG TCTCTAGCCC TCAAATGACC
GGCGAATGGG AGAAAGCATT GGCAGATATA GAAGCAGGTC AAGTTAATCC CAAACGCTTT
ATGTCTGAGA TTATTAGTCT AACTAAAAAG ATAGTTAACC TAGCTAAAGA ACAAAAAACA
AATGGATATA TGCCCGAATC AACAAAGGAA GTAGTAGGAA AATGTCCCTT ATGTGGCAGA
GAAGTTGTGG AATATGCAAA AAAATTTGGC TGTGGAGGAT TCCGTGAGGG TTGTGCTTTT
TCATTTGGCA AACAAATTTT GAAGAAAAAA ATAACAGTCA AACAGGCAAA ACAGTTATTA
ACTAACGGTA AAGTACTGAT TAAAGGATTC ACATCTTCTA AGACAGGGAA AAAATTTGAT
GCGGCCTTAG TTCTTAAGGA TGGAAAAGTT TCCTTTGATT TTTCATAA
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| Protein sequence | MKQLILAEKP SVGRDIVNAI GGHFEKRDGY YENSQYIISW AIGHLVELCE PEDYQPNLKK
WTLSALPIIP ECFKLKPNPK TIKQYKVVKQ LLNRPDVELI AGTDAGREGE LILRYIMRLS
GYSRPFKRLW LSETTPESIR KGLANPLPGQ AKDLLAAAAE CRSHADWLIG INATRAFTKK
HGDLFSIGRV QTPTLGLIVA REKEIKTFIP AHYWELYADF VTTDGQVYRG KWFKNKNKNR
FNQEADGISI KNKIVGQDGS VIKVEEKAVS EPPPTLFNLN DLQKEANKKF GFTASQTLEI
AQALYEKHKL LSYPRTEFKH LTNELAKTIP SRLSALGSVS GYSKFVAYAQ SAPKPGKRFI
DDAKVGDHHA LIPTNVKPTA ALSPNEAKIY NMVARRFLAM FFPAAEYKQT KIMTSVSDET
FLTSGKIELS PGWKEVIPPL KGENKEKSDE EVLLPPLTKG ENVAVTKAKL QQKKTEPPKR
YTEGTLLAVM EGAGKFVDDK ALKDAMKGHG LGTSATRAAI IERLIKVGYV ERKSKTLIPT
QKGETLISLV PEVVSSPQMT GEWEKALADI EAGQVNPKRF MSEIISLTKK IVNLAKEQKT
NGYMPESTKE VVGKCPLCGR EVVEYAKKFG CGGFREGCAF SFGKQILKKK ITVKQAKQLL
TNGKVLIKGF TSSKTGKKFD AALVLKDGKV SFDFS
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