Gene Dred_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1836 
Symbol 
ID4955710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2015648 
End bp2016670 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID640181010 
ProductABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component 
Protein accessionYP_001113186 
Protein GI134299690 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAAAAT TTAAAAGCAT ACTAGTTGTC ATAGCACTTA TGTCCCTAGT CCTTGCAGTA 
TTTAGCGGCT GTACAAATGA TACCGGTAAA ACCAGCGGAG AATTGACCAA GGTTCGACTT
TGTGAAGTTG TACACTCCAT TTTCTATGCT CCTCAGTACG TGGCCATCAA TGAAGGTTTC
TTTAAAGAAG AGGGTCTGGA TATTGAACTC ACAACCGGCC AAGGTGCAGA CAAAGTAATG
ACTGCATTAC TTTCCAATGC TGCCGACATC GGTTTGGCCG GGCCGGAAGC CACAGTGTAT
GTATATAACC AGAAAAAGCA AGATTATGTT ATTAATTTTG CCCAACTTAC CAAAAAAGAT
GGTTCTTTCC TGGTGGGAAG AAACCAGGAA CCCGAATTTG AGTGGGAAAA TTTGAAAGGT
AAAACTATTA TCGGTGGACG TCCTGGTGGT GTTCCTGAAA TGGTACTAGA ATATGTCTTG
AAAAAACACG GTCTCACTCC GGGTAAAGAC GTTAATATAA TAACTAACCT GCAGTTTACT
GCCACCGCAG GTGCCTTTAA GGGTGGTACC GGTGACTATG TAGCCCTTTT TGAACCTACT
GCCAGCCTAA TGGAAAAAGA AAAGGCCGGC TACGTAGTGG CCTCCTTGGG CCAGTCCAGC
GGCGAAATTC CCTACACCGT TTACATGGCG CAAAATAGTT TCATGGAAAA AAATCCTGAA
GTCATCCAGA AGTTTACCAA TGCCCTATAC AAAGCTCAGC TCTGGGTTGC TAATCACAGC
CCGCAAGAAA TTGCATCCTC CATTCAGCCC TTCTTCCCTG ACACCGACCT GGACCTCCTG
GCAGCGGTCA TTGAACGCTA CAAATCCCAG GACACCTGGA ACACTAATCC GGTAATGGAT
AACCAAGCCT TCAATTACCT GCAAGAGATT ATTCAGGTGG CCGGAGAATT AGATAAGCCG
GTGGAACCTA ATGTCCTAAT AACACACGAG TATGCTGAAA AAACAGTTAT CTCAAAAAAA
TAA
 
Protein sequence
MQKFKSILVV IALMSLVLAV FSGCTNDTGK TSGELTKVRL CEVVHSIFYA PQYVAINEGF 
FKEEGLDIEL TTGQGADKVM TALLSNAADI GLAGPEATVY VYNQKKQDYV INFAQLTKKD
GSFLVGRNQE PEFEWENLKG KTIIGGRPGG VPEMVLEYVL KKHGLTPGKD VNIITNLQFT
ATAGAFKGGT GDYVALFEPT ASLMEKEKAG YVVASLGQSS GEIPYTVYMA QNSFMEKNPE
VIQKFTNALY KAQLWVANHS PQEIASSIQP FFPDTDLDLL AAVIERYKSQ DTWNTNPVMD
NQAFNYLQEI IQVAGELDKP VEPNVLITHE YAEKTVISKK