Gene Dred_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1784 
Symbol 
ID4956343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1955299 
End bp1956483 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content46% 
IMG OID640180957 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001113134 
Protein GI134299638 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC GTGAAGTTGT TATCGTTAGT GCGGTCCGTA CACCTATTGG TAGTTTCGGG 
GGTACCCTGT GTAATATCCC CGCTGCAGAA TTGGGTGCTA TCGCCGTAAA GGAAGCCCTG
CAGCGTATTG GCTTAGATGG CAAAGATGTT GATGAAGTAA TTTTAGGTAA TGTCATTCAG
GCAGCGCAAG GGCAAAACCC TGCTCGTCAA GCATCTTTAA AAGCGGGTAT TCCCATAGAA
GTGCCTGCCT ATGCTGTAAA TATGGTTTGT GGTTCTGGTC TTAAGACAGT AGCCATGGCT
GCCAATGATA TCATATGTGG GGAAGCCGAA ATAGTTGTAG CAGGTGGCTT TGAGAATATG
AGTATTGCCC CCTACGCCAT TGAGAAGGCA CGTTATGGTT ACCGCATGGG GGATGGAAAA
ATTGTAGATA CCATGATTAA AGATGGTCTT ACCTGTGCTT TTAATCATTA CCACATGGGT
ATTACGGCAG AAAATATTGC AGAACGTTAC GGCCTTACCC GTGAAGCCCA AGACAACTTT
GCATTAGCTA GTCAACAAAA GGCAATTGCT GCCATTGACC GGGGAGCATT TAAGGAAGAG
ATTGTACCTG TTGTCATTCC GCAAAGAAAA GGTGATCCTA AAATATTTGA CACCGATGAA
TTCCCCAGAA GAGGAACAAC AATAGAAGGG CTATCTAAAC TAAAGCCTGC CTTCAAAAAA
GATGGAACAG TAACAGCGGG GAATGCCTCT GGCATTAATG ATGGTGCAGC GGCTTTGGTA
GTTATGTCTG CAGAAAAAGC TGCTCAACTG GGCCTAAAAC CTATGGCTAC TATTTTATCC
GGCGGATCTG CCGGTGTGGA TCCTTCTGTT ATGGGTCTTG GTCCCATTCC TGCCAGCCGG
AAAGCCCTAG CTAAGGCTGG TATGACAGTA GATCAAATGG ACCTTATAGA AGCAAACGAA
GCCTTTGCTG CTCAATCTCT GGCAGTGGTA AAAGATTTAG AATTGCCTAC AGAAAAGGTA
AATGTTAACG GTGGTGCCAT TGCTATTGGT CACCCTGTGG GAGCCAGCGG TGCCCGTATT
TTAGTAACCC TGCTCTATGA AATGAAACGT AGAGATTCCC GTTTCGGTTT AGCTACCCTT
TGTATTGGTG GTGGTCAGGG GCAAGCTTTG GTTGTAGCTA GATAG
 
Protein sequence
MSKREVVIVS AVRTPIGSFG GTLCNIPAAE LGAIAVKEAL QRIGLDGKDV DEVILGNVIQ 
AAQGQNPARQ ASLKAGIPIE VPAYAVNMVC GSGLKTVAMA ANDIICGEAE IVVAGGFENM
SIAPYAIEKA RYGYRMGDGK IVDTMIKDGL TCAFNHYHMG ITAENIAERY GLTREAQDNF
ALASQQKAIA AIDRGAFKEE IVPVVIPQRK GDPKIFDTDE FPRRGTTIEG LSKLKPAFKK
DGTVTAGNAS GINDGAAALV VMSAEKAAQL GLKPMATILS GGSAGVDPSV MGLGPIPASR
KALAKAGMTV DQMDLIEANE AFAAQSLAVV KDLELPTEKV NVNGGAIAIG HPVGASGARI
LVTLLYEMKR RDSRFGLATL CIGGGQGQAL VVAR