Gene Dred_1769 details

Gene Information

• Locus tag: Dred_1769
• ID: 4956278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1936118
• End bp: 1936522
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640180942
• Product: cobalamin B12-binding domain-containing protein
• Protein accession: YP_001113119
• Protein GI: 134299623
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00734137
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTA GAAGAATTCG CATACTGCTC GCTAAACCTG GTCTTGATGG TCATGATCGT 
GGTGCCAAGG TATTGGCCAG ATGCTTCCGA GATGCCGGTT TTGAGGTAAT CTATACTGGT 
TGTCATCAAA CTCCAGAGCA AATAGCTGCT GCTGCCCTTC AGGAAGATGT TGATGTTGTG 
GGGTTAAGCT GTTTATCGGG TGCACATAAG TATTTATTCC CTCAAGTAGC CAAACTTTTA 
AAGGATGAAG GAGCCGACGA TATAGTGGTT ATAGGCGGGG GTATTATACC AGAACAGGAT 
ATGGATGCCC TTTATGAGGC AGGTCTTAAA GCTATTTTTA CTCCAGGAGC CACTCTTGAA 
TCATTGGTGG AGTGGATTAA TACAAATGTA ACCCCAAGGG CGTGA 

 

Protein sequence

MSVRRIRILL AKPGLDGHDR GAKVLARCFR DAGFEVIYTG CHQTPEQIAA AALQEDVDVV 
GLSCLSGAHK YLFPQVAKLL KDEGADDIVV IGGGIIPEQD MDALYEAGLK AIFTPGATLE 
SLVEWINTNV TPRA