Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1703 |
Symbol | |
ID | 4955771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1861114 |
End bp | 1863312 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180878 |
Product | primosomal protein N' |
Protein accession | YP_001113055 |
Protein GI | 134299559 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTATG CTGAAGTGGT TGTGCCGGTG CCGGTTCGGT CTATATATCA AACCTTTCAT TATTGGGTGC CGGAGGCCCT GCAGAGTGAA CTGCTAAAGT TCAGCCGGGT CGAGGTACCC TTTTCTGGTA GGTTGATTCA AGGTTTTGTC ATTGGTTTTG GCGAACCCCC TCGGCTAGCA AAGATAAAAA GCATCAAAGG TATTGTTGAA AAAAAACCGT TCTTGGATGA AGAACTCTTC AAAACAGCAC AGTGGATGTC ACAGCGTTAC CTCTGTGGTT TAGGTGACGC TCTTCATTGT ATTGCTGGAT CATCTGTGCC CAGTAGGAAA GATGAAAAAT ATAGCAAGGG ACTTTTTGCT ACTGTTAATA ATAGTGACCA GGCGGGTCTG GTAAGAGCCC CCAAACAAAA ACTGGCCCTA GAGGTGGCTC TTGCGAAACC CGGTTTAAAC AAAATGGAGT TAGCCACTGC ATCAAGTACC TCAGTAGCCG TTATCAATGC GTTAATTGAG AAGGGTTTAT TAAAGGAAAA ATTTCTACAA ATCAAGGAAG ATATTAGCTT CCACGGCAAA TTACCGCAGT TAACCAAGGA ACAGTCCTTT GCTGTGGGGG AGATTTGCCA GGCATTGACA GCAGAAAAAC CATCGGCCTG GCTATTGCAT GGTGTTACGG GCAGTGGTAA AACAGAAATA TATCTTAGAA TCATACAGGA TGTCTTAAAA ATAAACCGTC AGGCCATTGT CTTGGTGCCG GAAATAGCGC TGACTCCTCA AATGGTTCAT AGGTTTAAAA CTCGTTATGG GAACCAAGTG GCTTTATTAC ATAGTGGCCT ATCCCAGGGG GAAAGATATG CCGAAAAGGT GCGTATTCGA TCTGGCACAG CAAAGGTTGT ACTGGGAACT CGTTCAGCTG TTTTTGCCCC CACACCGAAT CTTGGTGTAA TTATCATTGA TGAGGAACAT GAGTCCTCCT ATAAGCAGGA TGAGAACCCA AAATATCACG CCAGGGAAGT GGCATTACAA AGGGCTGCTC AGTATAAGTC GGTAGTTGTT TTGGGAAGTG CAACACCAGC CCTGGAGAGT TTTTGCAGGG CACGTCAAGG AGGACCTTAC AAACTCCTTC GTCTTACCCA ACGGGTTGAC CATAGAGAAC TTCCCCAAGT TCACATCGTT GATTTGCGTG AAGAGTTGGC CAGAGGGAAT ACAGGAATCT TTAGTAATAC ATTAAAGAAA GCCCTTAGCA AAAGGATAGA AAAAAAAGAA AAAAGTATTC TGTTTTTAAA TCGACGGGGC TATGCCACGG TGGTGGTGTG CCGCCAGTGT GGTCAGGTTA TAAAATGCCC CCGTTGTGAT ATATCTTTAA CACTCCATAC CAATGGTTTG CTGAGGTGCC ATTATTGCGG TTATGGCACT GGGGCCCCTA AGAAATGTCC CCAATGTGCC AGCACTGCTA TACGAAGCTT TGGTTTGGGA ACCCAGAGGG TAGAAGAAGA AGTAAAGCAG TTATTTCCTG ATGTGCCCGT GCTGAGAATG GATGCGGACA CCACAACCCG CAAAGGGTCC CATCAGAAAT TGCTTGATCA ATTTATTCAG GGAAATGCTT CGGTGTTAAT TGGCACTCAA ATGATTGCCA AGGGATTAGA TATACCGGCA GTAACCCTAG TAGGGGTGGT CAATGCAGAC ACCACCCTTC ATATGCCGGA TTTTCGGGCA GCAGAGCGAA CATTTCAGTT ATTAACCCAG GTTGCTGGTC GTGCGGGTCG GGGTGAAACA GAGGGAGAAG TTATTATCCA AACCTATGAT CCGGAGCATT TTAGTATTTT AAATGCTCAG CAACATGATT ATATTAATTT TTATCAAAAA GAAATGACAA CTAGAAAAGT TTTACGCTAT CCCCCCTTTA GTTACATTAT TCGTATTCTG TTTTCTGGAC TTAATGAAGG GGATGTTATC AGTGCGGCCC AGAGTTGGCA GGAACGATTA ACTGTCATTG CAAAAAAAGT TGGTAACGTA GATATTGAGG TTCTAGGCCC TGCACCAGCA GGCATACCTA GAATCAAAGA CCGCTATAGG TGGCAGTTGA TCCTAAGGGG TTCAGTGAGC CGTGATATTA GAAAAATTGC TGCTCTCGTC TTGGAACAGG CGGGTATACG TTTTAAACAA GTTTCTGTTA GTATTGATGT TGATCCGTTA ACATTATAA
|
Protein sequence | MLYAEVVVPV PVRSIYQTFH YWVPEALQSE LLKFSRVEVP FSGRLIQGFV IGFGEPPRLA KIKSIKGIVE KKPFLDEELF KTAQWMSQRY LCGLGDALHC IAGSSVPSRK DEKYSKGLFA TVNNSDQAGL VRAPKQKLAL EVALAKPGLN KMELATASST SVAVINALIE KGLLKEKFLQ IKEDISFHGK LPQLTKEQSF AVGEICQALT AEKPSAWLLH GVTGSGKTEI YLRIIQDVLK INRQAIVLVP EIALTPQMVH RFKTRYGNQV ALLHSGLSQG ERYAEKVRIR SGTAKVVLGT RSAVFAPTPN LGVIIIDEEH ESSYKQDENP KYHAREVALQ RAAQYKSVVV LGSATPALES FCRARQGGPY KLLRLTQRVD HRELPQVHIV DLREELARGN TGIFSNTLKK ALSKRIEKKE KSILFLNRRG YATVVVCRQC GQVIKCPRCD ISLTLHTNGL LRCHYCGYGT GAPKKCPQCA STAIRSFGLG TQRVEEEVKQ LFPDVPVLRM DADTTTRKGS HQKLLDQFIQ GNASVLIGTQ MIAKGLDIPA VTLVGVVNAD TTLHMPDFRA AERTFQLLTQ VAGRAGRGET EGEVIIQTYD PEHFSILNAQ QHDYINFYQK EMTTRKVLRY PPFSYIIRIL FSGLNEGDVI SAAQSWQERL TVIAKKVGNV DIEVLGPAPA GIPRIKDRYR WQLILRGSVS RDIRKIAALV LEQAGIRFKQ VSVSIDVDPL TL
|
| |