Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1695 |
Symbol | |
ID | 4955498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1854416 |
End bp | 1855594 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180870 |
Product | LL-diaminopimelate aminotransferase |
Protein accession | YP_001113047 |
Protein GI | 134299551 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.126823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTTTA AAGAAGCGAG GAGAATTAAA AATTTACCAC CCTACCTTTT TGCTAGAATT GAACAGGTGA TTGCTCAAAA AAAAGAAGAG GGTGTTGATG TCATTAGTCT AGGTATCGGT GACCCTGATA TGCCCACGCC GGAACATATA ATTAAGGATG CAGAAAAGCA ACTGTATGTT GCTGAAAACC ACCAATATCC ATCCTCGGTG GGAATGCTTT CCTATCGTAA ATCTGTGGCG GATTTTTATG CAAGGCGTTT TGGGGTAGAG CTAGATCCTA AAACAGAAGT TGTTTCTTTG ATTGGTTCCA AAGAAGGGAT TGCCCATATA TCCTGGTGTT ATTTAGATCC TGGTGATGTT GTGCTGGTAC CAGATCCGGG TTATCCCGTT TACAGCGGTG GTGCCATTTT GGCCGGCGCT GAACCTTATT ACATGCCCCT GACGGCGGAT AAGGGATTTT TGCCAGACCT CAACGCCATT CCGGAGGATG TTGCCAGAAA GGCCAAAATG ATGTTTATCA ATTATCCAAA TAATCCTACC GGTGCTGTTG CTGACGAGGC CTTTTACATA GAGGTAATCG CATTTGCCAG AAAATATGAA ATCTTGGTTT GTCATGATAA TGCCTACTCG GAGGTTTCTT ACGAAGGTTA TAAGCCCCTT TCCTTTCTAG AGATTCCCGG GGCCAAAGAA GTGGGCATAG AGTTTAGTTC TGTTTCCAAA GCCTACAATA TGACTGGTTG GCGCATTGGG TGGGCTGTGG GTAACCCGGC GGTAATAGAG GCTTTGGGCC GGTTTAAAAC CAATATTGAC TCAGGTCAGT TTCAGGCAAT TCAATACGCT GCTATGGCTG GATTAAACGG CCCCCAGGAA ATTGTGGCGA CCAATAATGA AATATACCGT GAGCGTAGGG ACATTGTTGT GGATGGGCTA AATGCCATGG GCTGGAGTCT AGAAAAACCC AAAGCGACTT TTTACATTTG GGCGCCGGTT CCTAAAGGAT TTACTTCGGC CTCCTTTGCA GAGTATGTTA TCGAAAGGGC CGGTGTAGTC ATAACACCTG GCAATGGTTA CGGGGAACAG GGAGAAGGAT ATTTCCGTAT ATCCATTACA ATACCCAAGG AACGTATTGC TGAAGCGCTA GAACGTATGA AAAATAATAT TGGCAAGGTT GAATTTTAA
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Protein sequence | MRFKEARRIK NLPPYLFARI EQVIAQKKEE GVDVISLGIG DPDMPTPEHI IKDAEKQLYV AENHQYPSSV GMLSYRKSVA DFYARRFGVE LDPKTEVVSL IGSKEGIAHI SWCYLDPGDV VLVPDPGYPV YSGGAILAGA EPYYMPLTAD KGFLPDLNAI PEDVARKAKM MFINYPNNPT GAVADEAFYI EVIAFARKYE ILVCHDNAYS EVSYEGYKPL SFLEIPGAKE VGIEFSSVSK AYNMTGWRIG WAVGNPAVIE ALGRFKTNID SGQFQAIQYA AMAGLNGPQE IVATNNEIYR ERRDIVVDGL NAMGWSLEKP KATFYIWAPV PKGFTSASFA EYVIERAGVV ITPGNGYGEQ GEGYFRISIT IPKERIAEAL ERMKNNIGKV EF
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