| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1691 |
|---|
| Symbol | |
|---|
| ID | 4956395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 1846579 |
|---|
| End bp | 1848357 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640180866 |
|---|
| Product | fibronectin-binding A domain-containing protein |
|---|
| Protein accession | YP_001113043 |
|---|
| Protein GI | 134299547 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG ATGGTTTGGT CATGGCCGCT GTGGCCCAAG AGCTGACAAG TGGATTAGTG
GGAGGTCGGG TTGAGAAAAT CCAACAACCC ACTACCCATG AACTTATACT GGTTATTCAT
ACCCGAGAAA AGGGTAAACA AAGGCTCCTT ATCTCTGCAG ATGCTCGGGA TGCCCGCATT
CATTTTACCC AAGCCTCCCA TGTAAATCCC CTATCTCCGC CGATCTTTTG TATGGTGCTG
CGCAAACACC TTGAAGGCGG TCGCATTCGT TCTGTGGAAC AGATTGGTTT AGAACGAATT
TTGCAATTTA CCGTAGATTC CCGCGACGAA CTGGGCCGTC CCGGAGAAAA GCATTTAATC
TGCGAGGTCA TGGGAAAACA TAGTAATATA CTACTGGTGG ATCCCACAAC TAACACTATT
TTGGATGGCA TTCATCGTTA CTCCCATGCC GTTTCCCGTT ATCGGGAAGT TTTACCGAAT
CGTCCTTACC TGTCGCCTCC GGAGCAAAGC AAATTCGATC CCCGTAAGCT AACGGAGGAT
CAATTTAGAG AGATCTTGAT GTCCGGGGAT ATTGACCTCA AGGTTACAGA TATTTTTTTA
CAGAGAATTG CCGGTGTGGG GCCCTTAACC TGTCGGGAGT TGGTGTTCAG GGCAGGGTTG
GCAGTTGACT ATAGATTAGA ACACTGTGGC GATTATGAAT TAACTCAACT GTGGCAACAA
ATTCAATACC TTGGTGAGCT ACTTGAAAAG GGGTACTTTC AACCCACACT ACTTTTGGAC
CGCCGCGAAT TACCAGTGGA TTTTTCTGCC ATTGATCTAT CACATCTAAA GTTTTTCAAA
AAAGAAACAG GCAGTATCAG TCATGTTTTG GATGGCTACT ATAGAAAAAT TATCGAACTC
AGACAATTGG AGTCCTTCCG CCATTCTCTT TTACAGACAG TCCGCAAGGA AATCGGTCGC
TTAAAAAAGA AGATATCACT CTATCAGAAA TCCCTCGCCT CCGCCGAAAA AGCTGATGAG
TATCGTATCT TTGGGGAGTT ATTGACAGCA AATCTGTATC AAATTGACCA GGGAAAAGAG
GCCAGGGTGC AAAACTTTTA TGATCCAGCG GGAACAGAAA CAATCATCGC AATGGATTCG
TCGTTAACCC CCTCCCAAAA TGCCCAGGAA TACTTTAGAA AATATTTGAA GGCTAAAAAT
ACCCGGAATG CAGTGACCCA ACAATTGGAG CAGGCAGAAT CCGAGCTGAA CTATCTTGAT
GCAGTGGATA CGGCCCTTTC CCAAGCAATG TATCAGGAGG ATCTAAAGGA AATACGTAGT
GAATTAGAAG AGCAAGCCTA CCTTAAGCCT AAAATACAAC AGGTTAAAAA TCGCTCTCAA
AAAGAAAAAC TTCGTCCCCA ACCCATGTCT TTTCTATCTT CCGAGGGCTT TACCATTTTG
GTAGGTAAAA ATAATAAACA AAATGATTAC CTATCCTTAC GTCTGGCCAG CGAGGACGAC
ATTTGGTTGC ATACTAAAGA TATTCCAGGC TCTCACGTCA TCATTCGTAA TCCTGCGGGA
GAAGTGCCAA ATCAAACTTT ACTAGAAGCA GCCACCCTCG CTGCTTGGTT TAGTAAATCA
AGACAATCCG GGAAGGTGCC GGTTGATTTC ACTCTGCGGC GGCATGTACG CAAACCCAAG
GGTGCCAAAC CGGGGATGGT TATATACGAT AACCAACAAA CCCTCTATGT CGCGCCCAGC
GAGGAACTGG TGGACCAATT GGCTGCAAAA AAAGATTAA
|
|---|
| Protein sequence | MAFDGLVMAA VAQELTSGLV GGRVEKIQQP TTHELILVIH TREKGKQRLL ISADARDARI
HFTQASHVNP LSPPIFCMVL RKHLEGGRIR SVEQIGLERI LQFTVDSRDE LGRPGEKHLI
CEVMGKHSNI LLVDPTTNTI LDGIHRYSHA VSRYREVLPN RPYLSPPEQS KFDPRKLTED
QFREILMSGD IDLKVTDIFL QRIAGVGPLT CRELVFRAGL AVDYRLEHCG DYELTQLWQQ
IQYLGELLEK GYFQPTLLLD RRELPVDFSA IDLSHLKFFK KETGSISHVL DGYYRKIIEL
RQLESFRHSL LQTVRKEIGR LKKKISLYQK SLASAEKADE YRIFGELLTA NLYQIDQGKE
ARVQNFYDPA GTETIIAMDS SLTPSQNAQE YFRKYLKAKN TRNAVTQQLE QAESELNYLD
AVDTALSQAM YQEDLKEIRS ELEEQAYLKP KIQQVKNRSQ KEKLRPQPMS FLSSEGFTIL
VGKNNKQNDY LSLRLASEDD IWLHTKDIPG SHVIIRNPAG EVPNQTLLEA ATLAAWFSKS
RQSGKVPVDF TLRRHVRKPK GAKPGMVIYD NQQTLYVAPS EELVDQLAAK KD
|
|---|
| |