Gene Dred_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1651 
Symbol 
ID4956002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1805753 
End bp1807534 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content47% 
IMG OID640180827 
Producthydrogenases, Fe-only 
Protein accessionYP_001113004 
Protein GI134299508 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID[TIGR02512] hydrogenases, Fe-only 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.556328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG TAACACTAAC CATTGACAAT GTAAAAGTTG AAGTTGAACA AGGTTCAACG 
ATATTAGATG CTGCGAAAAA AATTGGCATT AATATTCCAA CCCTTTGCTA TATGAAAGAG
ATTAATGCCA TTGGCGCCTG TCGTATTTGC GTGGTAGAAG TAGTAGGTGC CCGGGCCCTC
CAGGCTGCCT GTGTTACCCC AGCTACGGAA GGCATGGTTG TAAAGACCAA CTCAGCAGCC
GTTAGAGCTT CCCGCAAAAT GACTCTTGAA CTGATTCAGT CTAATCACCC GCAGGAATGC
AACACCTGCC TGCGTAACAA CAATTGTGAA CTGCAAGCTC TTTCCGAAGC CATGGGACTT
AAAGAGGTTC GTTTTATAAG ACCTTCCCAA AGCCATAGTA AAGACGATAT CGACAACTCT
TCCCCATCCA TCGTTCGTGA CCCTCGGAAG TGTATTTTGT GCCGTCGTTG TGTAGCAGTT
TGCGAAAAGG TACAAGGCGT TAAGTGTATC AGTGCTGTAA ACCGTGGCTT TGAAACCACC
ATTGCACCTC CATTTAACCA AGGTCTGTTT GATGTAAACT GCACCATGTG CGGTCAGTGC
ACCCTAGTCT GCCCCACTGG TGCCATCACT GAAGTGGATG ACACTGGTAA AGTATGGCGC
GCTCTGGATG ATTCAACCAA ACACGTGGTT GTTCAAACTG CACCCGCAGT ACGCGTAGCC
ATTGCTGAAG AATTTGGTAT GGAACCAGGC ACTGTTAGTA CCGGCAAACT GGTTGCAGCT
CTACGTCGCC TCGGCTTTGA TAGCGTCATG GATACCGACT TTGCAGCTGA CTTAACCATT
TTAGAAGAGG GTAATGAATT TATTAAGCGG GTCACCGAAG GTGGCGTACT GCCGATGATC
ACTTCCTGCA GTCCTGGTTG GATTAAATAC ATTGAAATGT ATTATCCCGA CCTGTTGGCT
CACCTTTCCA CTTGTAAGTC CCCTCAACAA ATGTTTGGAG CACTGGTTAA GTCCTTCTAT
GCTGAGAAAA AAGCAATTGA TCCAGCCAAT ATCGTCAGTG TATCGATCAT GCCTTGTACA
GCTAAGAAGT TTGAAGCCCA GCGTGATGAA CTTAGGGACA GTGGTTATCA GGATGTGGAC
ATTGTTCTTA CCACCCGCGA ACTTGCACGT ATGCTCCGAG AAATTGGCAT TGATTGGGAT
AATCTTTCCG ATGACGATTA CGATGCCCCA ATGGGCTTAT CCACTGGTGC TGCGGTTATC
TTCGGTGTTA CCGGCGGTGT AATGGAAGCA GCTGTACGTA CTGTATACGA AGTACTTACC
AAGGAAGCCA TGCCAAATAT TAACTTAACC CCAGTACGTG GCATGGAAGG TATTAAAGAA
GCTACCCTTA AGGTTGGAGA CCTAGATGTA AAAGTAGCAG TTGCTCATAC CCTGGGTAAT
GCCCGTAAAC TTTTAGATAA AATCCGTGCC GGCGAAGCCG ATTATCACTT TATCGAAATA
ATGTGCTGCC CTGGTGGTTG TATTGGCGGC GGTGGTCAAC CTATTCCTAC GAACCTAGAA
GTACGCCTTA AACGTATTGC CGGCACCTAT AGGGCTGATG AAGCTTTGCC ACTTCGTAAA
TCCCATGAAA ACCCTGCCAT CAAGGCAATT TATGAAGAAT TCTTGGGAGA ACCCCTGGGA
GAGAAGTCAC ATAAACTTCT TCATACCCAC TATGTGCCCC GTGGCGTTTA TAGGAAACCA
GAAGGCCTAC CGAATAAAGT ACCCTCAGGA GAACATCATT AG
 
Protein sequence
MATVTLTIDN VKVEVEQGST ILDAAKKIGI NIPTLCYMKE INAIGACRIC VVEVVGARAL 
QAACVTPATE GMVVKTNSAA VRASRKMTLE LIQSNHPQEC NTCLRNNNCE LQALSEAMGL
KEVRFIRPSQ SHSKDDIDNS SPSIVRDPRK CILCRRCVAV CEKVQGVKCI SAVNRGFETT
IAPPFNQGLF DVNCTMCGQC TLVCPTGAIT EVDDTGKVWR ALDDSTKHVV VQTAPAVRVA
IAEEFGMEPG TVSTGKLVAA LRRLGFDSVM DTDFAADLTI LEEGNEFIKR VTEGGVLPMI
TSCSPGWIKY IEMYYPDLLA HLSTCKSPQQ MFGALVKSFY AEKKAIDPAN IVSVSIMPCT
AKKFEAQRDE LRDSGYQDVD IVLTTRELAR MLREIGIDWD NLSDDDYDAP MGLSTGAAVI
FGVTGGVMEA AVRTVYEVLT KEAMPNINLT PVRGMEGIKE ATLKVGDLDV KVAVAHTLGN
ARKLLDKIRA GEADYHFIEI MCCPGGCIGG GGQPIPTNLE VRLKRIAGTY RADEALPLRK
SHENPAIKAI YEEFLGEPLG EKSHKLLHTH YVPRGVYRKP EGLPNKVPSG EHH