Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1651 |
Symbol | |
ID | 4956002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1805753 |
End bp | 1807534 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640180827 |
Product | hydrogenases, Fe-only |
Protein accession | YP_001113004 |
Protein GI | 134299508 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.556328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG TAACACTAAC CATTGACAAT GTAAAAGTTG AAGTTGAACA AGGTTCAACG ATATTAGATG CTGCGAAAAA AATTGGCATT AATATTCCAA CCCTTTGCTA TATGAAAGAG ATTAATGCCA TTGGCGCCTG TCGTATTTGC GTGGTAGAAG TAGTAGGTGC CCGGGCCCTC CAGGCTGCCT GTGTTACCCC AGCTACGGAA GGCATGGTTG TAAAGACCAA CTCAGCAGCC GTTAGAGCTT CCCGCAAAAT GACTCTTGAA CTGATTCAGT CTAATCACCC GCAGGAATGC AACACCTGCC TGCGTAACAA CAATTGTGAA CTGCAAGCTC TTTCCGAAGC CATGGGACTT AAAGAGGTTC GTTTTATAAG ACCTTCCCAA AGCCATAGTA AAGACGATAT CGACAACTCT TCCCCATCCA TCGTTCGTGA CCCTCGGAAG TGTATTTTGT GCCGTCGTTG TGTAGCAGTT TGCGAAAAGG TACAAGGCGT TAAGTGTATC AGTGCTGTAA ACCGTGGCTT TGAAACCACC ATTGCACCTC CATTTAACCA AGGTCTGTTT GATGTAAACT GCACCATGTG CGGTCAGTGC ACCCTAGTCT GCCCCACTGG TGCCATCACT GAAGTGGATG ACACTGGTAA AGTATGGCGC GCTCTGGATG ATTCAACCAA ACACGTGGTT GTTCAAACTG CACCCGCAGT ACGCGTAGCC ATTGCTGAAG AATTTGGTAT GGAACCAGGC ACTGTTAGTA CCGGCAAACT GGTTGCAGCT CTACGTCGCC TCGGCTTTGA TAGCGTCATG GATACCGACT TTGCAGCTGA CTTAACCATT TTAGAAGAGG GTAATGAATT TATTAAGCGG GTCACCGAAG GTGGCGTACT GCCGATGATC ACTTCCTGCA GTCCTGGTTG GATTAAATAC ATTGAAATGT ATTATCCCGA CCTGTTGGCT CACCTTTCCA CTTGTAAGTC CCCTCAACAA ATGTTTGGAG CACTGGTTAA GTCCTTCTAT GCTGAGAAAA AAGCAATTGA TCCAGCCAAT ATCGTCAGTG TATCGATCAT GCCTTGTACA GCTAAGAAGT TTGAAGCCCA GCGTGATGAA CTTAGGGACA GTGGTTATCA GGATGTGGAC ATTGTTCTTA CCACCCGCGA ACTTGCACGT ATGCTCCGAG AAATTGGCAT TGATTGGGAT AATCTTTCCG ATGACGATTA CGATGCCCCA ATGGGCTTAT CCACTGGTGC TGCGGTTATC TTCGGTGTTA CCGGCGGTGT AATGGAAGCA GCTGTACGTA CTGTATACGA AGTACTTACC AAGGAAGCCA TGCCAAATAT TAACTTAACC CCAGTACGTG GCATGGAAGG TATTAAAGAA GCTACCCTTA AGGTTGGAGA CCTAGATGTA AAAGTAGCAG TTGCTCATAC CCTGGGTAAT GCCCGTAAAC TTTTAGATAA AATCCGTGCC GGCGAAGCCG ATTATCACTT TATCGAAATA ATGTGCTGCC CTGGTGGTTG TATTGGCGGC GGTGGTCAAC CTATTCCTAC GAACCTAGAA GTACGCCTTA AACGTATTGC CGGCACCTAT AGGGCTGATG AAGCTTTGCC ACTTCGTAAA TCCCATGAAA ACCCTGCCAT CAAGGCAATT TATGAAGAAT TCTTGGGAGA ACCCCTGGGA GAGAAGTCAC ATAAACTTCT TCATACCCAC TATGTGCCCC GTGGCGTTTA TAGGAAACCA GAAGGCCTAC CGAATAAAGT ACCCTCAGGA GAACATCATT AG
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Protein sequence | MATVTLTIDN VKVEVEQGST ILDAAKKIGI NIPTLCYMKE INAIGACRIC VVEVVGARAL QAACVTPATE GMVVKTNSAA VRASRKMTLE LIQSNHPQEC NTCLRNNNCE LQALSEAMGL KEVRFIRPSQ SHSKDDIDNS SPSIVRDPRK CILCRRCVAV CEKVQGVKCI SAVNRGFETT IAPPFNQGLF DVNCTMCGQC TLVCPTGAIT EVDDTGKVWR ALDDSTKHVV VQTAPAVRVA IAEEFGMEPG TVSTGKLVAA LRRLGFDSVM DTDFAADLTI LEEGNEFIKR VTEGGVLPMI TSCSPGWIKY IEMYYPDLLA HLSTCKSPQQ MFGALVKSFY AEKKAIDPAN IVSVSIMPCT AKKFEAQRDE LRDSGYQDVD IVLTTRELAR MLREIGIDWD NLSDDDYDAP MGLSTGAAVI FGVTGGVMEA AVRTVYEVLT KEAMPNINLT PVRGMEGIKE ATLKVGDLDV KVAVAHTLGN ARKLLDKIRA GEADYHFIEI MCCPGGCIGG GGQPIPTNLE VRLKRIAGTY RADEALPLRK SHENPAIKAI YEEFLGEPLG EKSHKLLHTH YVPRGVYRKP EGLPNKVPSG EHH
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