Gene Dred_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1645 
Symbol 
ID4955523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1796875 
End bp1798437 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content41% 
IMG OID640180821 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001112998 
Protein GI134299502 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATC AATGGTTGTC GCTTATACCG CCAGTTCTGG CAATTGGATT GGCCTTATTT 
TCAAAAAAGG TAATTCCTTC TCTAGCCATC GGTATTATAT CTGGTGCCTT CATTCTTAGT
AATTACCAGC CTGTGGCGAC GATAACAAAA GCCCTAGGCA TGATGACCGA AAAGGTAACG
GATAGTTGGA ATTTATGTAT TTTAGGCTTT CTTGTCATCT TGGGAATATT AGTACATTTG
GTAACAGTAG CCGGCGGTTC TGCGGCCTAT GGAAAGTGGG CAGCTACCAA AATTAAAACC
AGATCCGGTG CTAAATTATC TACCTTCTTT TTAGGTATTC TCATATTTAT TGATGATTAC
TTTAACAGCT TAACAGTGGG TACCGTAATG AGACCCGTAA CTGATAAATA TAACATTTCC
AGGGCAAAGT TGGCATATGT TTTGGATGCC ACAGCAGCTC CCATCTGCAT TATTGCCCCT
GTATCCAGTT GGGTAGCCAC CATTATGTCT ACCATGGGAG ATAAATTTAA AGCCACGGGA
CTTGAGATGG AACCATTTTC AGCATTTCTA ATGACAATTC CCTTGAACCT TTACGCCATA
TTGACCATAA TAATGGTGAT TTTGGTTAGT CTATATAAAT TGGATTTTGG TCCTATGCTT
ACCCATGAGG AAAGGGCTGT GAATGAAGGG GACCTAGGTG TTTTAACGGT TGTAGCCAAT
GAAGAAGAAA AAGTTAGCGA TAAGGGCAAA GTTATGGATT TGGTGGTGCC CATTGCAGGG
TTGGTAGTAT TTGTTCTAAC CGCTATGGTG TATACAGGTG GCTACTTTGA CGGTGGTGTG
TCTGTTATCG GTGCCATTAA AAATACCGAT GCAGCAAAAT CTCTGCTATA TGGTGGCAGT
GCAGCTTTGG TCTTAAGTTT ACTAATGTTT CTCCCCAGGG GAGTTGTTAC GGTTGGGCAA
TTACCTAAGG CAGTATACGG CGGCTTTATG TCCATGCTAC CTGCTAATTT AATTTTGATT
TTTGCCTGGA CAATTGGTGG TATTATTGGC GAGTTAGGTA CTGGTGTTTA TTTGGCAAAC
CAATTGGGTG ATAAATTACC CTTCTGGGTC TATCCGTCCC TTGCTTTTAT ACTTTCTGGT
TTTATGGCCT TTGCGACGGG GACTTCTTGG GGTACCTTTG CTATTATGAT CCCCATTGCC
ATTGACTTGG CTCTGATTGT AGATCCCCAA TTATTAAGTA TATTAATGGC ATCTGTTTTA
GCTGGCGCAG TTTATGGAGA CCACTGCTCA CCTATCTCCG ATACGACAAT TTTATCTTCC
ACTGGTGCGG GCTGCAAACA TATAGACCAT GTTAGCACCC AGTTGCCCTA TGCCAGTTTG
GTTGGAAGCA TATGTTTTCT TGGCTATATT TTCTCGGCTG TTATGACCAA AATTACTGAT
AGTGTACTCT TGAATGCGAC ATTGACTCTT ATTATTTGCT CCGGCTTGCT TGTGATTTCT
TTAAATGTTT TACACCGTTT AAGCACTGCC AGAGTAGAGA AAAGTAAAGA AATAACAGTA
TAG
 
Protein sequence
MDYQWLSLIP PVLAIGLALF SKKVIPSLAI GIISGAFILS NYQPVATITK ALGMMTEKVT 
DSWNLCILGF LVILGILVHL VTVAGGSAAY GKWAATKIKT RSGAKLSTFF LGILIFIDDY
FNSLTVGTVM RPVTDKYNIS RAKLAYVLDA TAAPICIIAP VSSWVATIMS TMGDKFKATG
LEMEPFSAFL MTIPLNLYAI LTIIMVILVS LYKLDFGPML THEERAVNEG DLGVLTVVAN
EEEKVSDKGK VMDLVVPIAG LVVFVLTAMV YTGGYFDGGV SVIGAIKNTD AAKSLLYGGS
AALVLSLLMF LPRGVVTVGQ LPKAVYGGFM SMLPANLILI FAWTIGGIIG ELGTGVYLAN
QLGDKLPFWV YPSLAFILSG FMAFATGTSW GTFAIMIPIA IDLALIVDPQ LLSILMASVL
AGAVYGDHCS PISDTTILSS TGAGCKHIDH VSTQLPYASL VGSICFLGYI FSAVMTKITD
SVLLNATLTL IICSGLLVIS LNVLHRLSTA RVEKSKEITV