Gene Dred_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1618 
Symbol 
ID4957962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1757995 
End bp1758798 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content48% 
IMG OID640180794 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001112971 
Protein GI134299475 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000197241 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAT CTTCTCAAAA TTTACGTGTG AAATTGGTTA AAAAGTTGGC CCAACGGAAT 
TTTCGGCAAA AGGAAAGGAA ATTGGCGGTG GAGGGCATCC GATTTGTTGA AGAGGCCTTA
AGTAGCACCT GGCAAACGGA GATTTTACTT TACACGGATC AGGCCTGCCA GGCTCAACGG
GGAAAAATAC TGTTGGATTT GGCCAGGGAT AAAGGGGTCG AAGTACTGGC GGTGTCAGAT
GCTATTATGA AGGAACTATC GGACACCGAG ACTCCCCAGG GCATGCTGGC GGTACTTAGG
CAACCCGATT ATACCCTGGA GGATATTATC AGGCCCGATC AAAAGCCCCT GGTGGTGATT
GTGGATGGTG TTCAGGATCC GGGAAATCTT GGTACTATTA TCCGCTCCGC AGACGCTGCG
GGGGCCAGTG GAGTGATCTT ACTGAAGGGT ACGGTGGATA TTTATAACCC TAAAACATTA
CGGGCTACCA TGGGTTCTTT GTTTCATTTG CCAGTGATAC AGGTCAGTGA TGTTAACGAA
GCCTTGGAGT ATCTTGCATC CATAGGCGTT ACTTTGCTGG TGGGGGAACC TGCCGGTGGC
ATACCTGTTT TTAAAGCCAA CCTCCAAACT CCGGTAGGGA TTATTGTGGC CAATGAGGGA
GCGGGACCCA GGGAAGAGAT ATTTCGATAT AACCATCAGA AAATAACCAT TCCCATGCCC
GGATGTGCTG AATCTTTAAA TGTTGCCATT GCCACCTCCA TTATCCTTTA TGAGGCCATC
AGGCAGAGAC ATAAAATTCA GTAA
 
Protein sequence
MITSSQNLRV KLVKKLAQRN FRQKERKLAV EGIRFVEEAL SSTWQTEILL YTDQACQAQR 
GKILLDLARD KGVEVLAVSD AIMKELSDTE TPQGMLAVLR QPDYTLEDII RPDQKPLVVI
VDGVQDPGNL GTIIRSADAA GASGVILLKG TVDIYNPKTL RATMGSLFHL PVIQVSDVNE
ALEYLASIGV TLLVGEPAGG IPVFKANLQT PVGIIVANEG AGPREEIFRY NHQKITIPMP
GCAESLNVAI ATSIILYEAI RQRHKIQ